Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00265 ATGGCGACGAGGAATAGAACTTTGCTCTTTAGAAAATATAGGGATGCTTTGAAGAGCGTTAGAGTTCCGGCGAGCTCTTTGCTTGCGTCGGGTTCACCGTCGACGAGTTCTGGCGGAGGTGGTGGTCCGGTTATCGAATTGGTCAGCACCTCGATCCTGCATCCAAATGGTTCTTATGCTCCGCTTAGTACTGAGGATCCGGGTTATTCAAGTAGGGGTGCTCTTACAGTTGGTCTACCTCCAGCTTGGGTGGATGTTTCTGAAGAAATATCAACAAATGTTCAGCGTGCACGTGTAAAAATGGCTGAGTTATCCAAGGCACATGCAAAGGCATTAATGCCTTCATTTGGAGATGGTAAAGAAGATCAAAGATTAATTGAAGCTCTTACTCAAGAGATTACAGGTCTGATTAAGAAATCTGAGAAGAGGCTTCAAAGACTTTCTGCAGCAGGACCTTCTGAAGATTCCAATGTCAGAAAAAATGTCCAGCGTTCTCTTGCTACAGACCTTCAAAATCTTTCAATGGAGCTTCGGAAAAAACAATCAAGTTACCTCAATAGGCTCAGGCAGCAAAAGGAGGGTCAAGATGGGATTGACTTGGAGATGAATCTGAATGGAAGTAGATCTACTACGGAGGATGATGACTTGGATAACATGGTATTTGGCGAGCATCAGATGGCCAAGCTTAAAAAGAGTGAAGCATTCACAGTAGAAAGAGAAAGAGAAATCCAACAGGCAAGGGAAATAACTCTATTTACTGCTTCATTAGAATCTGTAAATGAGCTTGCTCAAATTATGAAGGATCTTTCAGTTCTTGTTATAGACCAGCAGGGCACTATTGTTGATAGGATTGACTATAACATTCAAAATGTTGCAACTACAGTCGACGAAGGCCTTAAACAGCTGCAGAAGGCTGAAAAAACACAGAAACAAGGAGGGATGGTAATGTGCGCATCGGTGCTTCTTATCATGTGCTTCATCATGTTGGTTCTCCTGGTCCTCAAGGAAATTTTTTTGTAA 1020 42.65 MATRNRTLLFRKYRDALKSVRVPASSLLASGSPSTSSGGGGGPVIELVSTSILHPNGSYAPLSTEDPGYSSRGALTVGLPPAWVDVSEEISTNVQRARVKMAELSKAHAKALMPSFGDGKEDQRLIEALTQEITGLIKKSEKRLQRLSAAGPSEDSNVRKNVQRSLATDLQNLSMELRKKQSSYLNRLRQQKEGQDGIDLEMNLNGSRSTTEDDDLDNMVFGEHQMAKLKKSEAFTVEREREIQQAREITLFTASLESVNELAQIMKDLSVLVIDQQGTIVDRIDYNIQNVATTVDEGLKQLQKAEKTQKQGGMVMCASVLLIMCFIMLVLLVLKEIFL 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7471511 7474341 - Bma021032.1 Bma05g00265 82349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00265 339 PANTHER SYNTAXIN 1 334 IPR045242 -
Bma05g00265 339 Gene3D - 80 297 - -
Bma05g00265 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 274 305 IPR000727 -
Bma05g00265 339 SMART tSNARE_6 228 305 IPR000727 -
Bma05g00265 339 CDD SNARE_syntaxin16 238 304 - -
Bma05g00265 339 SMART SynN_4 74 189 IPR006011 GO:0016020
Bma05g00265 339 PANTHER SYNTAXIN-43-LIKE 1 334 - -
Bma05g00265 339 Pfam SNARE domain 279 331 IPR000727 -
Bma05g00265 339 SUPERFAMILY t-snare proteins 79 298 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00625 Bma-Chr1:5664506 Bma05g00265 Bma-Chr5:7471511 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00265 K08489 - jre:109011309 520.39