Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00267 ATGAGCCAGATTGAAATATCTATGACAAGGGCTCCTCTTGTTCCTCTTGCGACTCTAATAGGTCGTGAGCTTAGGAAAGAAAAGGCTGAGAAACCCGTTGTAAAGTTTGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTTATAAAACCCGATTGCCAGCAGTTTCCTGGCAACCCGACATCATCATTTTCTGTCTTTGCGATTTTTGACGGGCACAATGGAATATCAGCCGCTATCTTTACAAAAGAACATTTATTGGGAAATGTGTTGAGTGCGATTCCTCAAGGGGTGGGTCGAGAAGAGTGGCTTCAAGCTCTTCCACGGGCTTTGGTTGCAGGTTTTGTAAAAACGGATATTGAGTTTCAACAGAAAGGCGAGACTTCTGGGACTACTGTCACATTTGTTGTGGTTGATGGATGGACTATTACTGTTGCATCTGTTGGAGATTCTCGGTGCATATTGGATACACAGGGAGGTGTGGTTTCTCTGCTGACTGTAGATCACAGGCTAGAGGAGAATGAAGAGGAGAGGGAGCGTGTGACTGCCAGCGGGGGTGAGGTAGGAAGGCTCAATGTTTTTGGAGGAAATGAGGTCGGGCCTCTCCGCTGCTGGCCAGGTGGACTATGTCTTTCTAGGTCTATTGGTGACACAGATGTGGGAGAATATATTGTTCCCATTCCGCACGTTAAGCAAGTGAAGCTTTCAACTGCTGGAGGACGATTGATTATAGCTTCTGATGGAATTTGGGATGCATTATCGTCTGATATGGCTGCCAAATCTTGTCGTGGTTTACCCTGCTGA 810 46.42 MSQIEISMTRAPLVPLATLIGRELRKEKAEKPVVKFGQAALAKKGEDYFLIKPDCQQFPGNPTSSFSVFAIFDGHNGISAAIFTKEHLLGNVLSAIPQGVGREEWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSTAGGRLIIASDGIWDALSSDMAAKSCRGLPC 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7551629 7552977 + Bma021034.1 Bma05g00267 82351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00267 269 CDD PP2Cc 43 266 IPR001932 -
Bma05g00267 269 Gene3D - 38 268 IPR036457 -
Bma05g00267 269 Pfam Protein phosphatase 2C 50 265 IPR001932 -
Bma05g00267 269 SMART PP2C_4 23 267 IPR001932 -
Bma05g00267 269 PANTHER ALPHABET, ISOFORM E-RELATED 2 268 - -
Bma05g00267 269 ProSiteProfiles PPM-type phosphatase domain profile. 28 269 IPR001932 -
Bma05g00267 269 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 268 - -
Bma05g00267 269 SUPERFAMILY PP2C-like 43 266 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00267 Bma13g00613 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00267 Bma-Chr5:7551629 Bma14g01907 Bma-Chr14:40766803 1.68E-134 dispersed
Bma05g00267 Bma-Chr5:7551629 Bma01g00627 Bma-Chr1:5679783 2.07E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00267 - - csv:101219622 493.426