Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00270 | ATGACATTTCGGAACACAGCGGGGCCGGAAAACTTCCAAGCGGTGGCGCTGAGAGTAGACTCTGACCAATCAGCGTTCTTCCGATGCAGCATCGAAGGCCACCAAGACTCTCTCTACATCCACTCTCTCCGCCAATTTTACCGCGAGTGCTCCATCTCGGGCACCATCGACTACATCTTTGGCAACGGCGCTGCCGTTCTTCAAAACTGCAAAATCTTCACGGGAGTCCCTCTTACGCTTCAGAAGGTTACGATCACAGCTCAGGGTCGGAAAAACCCCCATCAGAGCACCGGCTTCACGATCCAAAACAGCTTCATCTACGCCTCCCAGCCGACGTACCTGGGTCGGCCGTGGAAGCAGTACTCGAGAACAGTCTTTCTCAACACCTACATGAATGAGTTGGTGCAACCCAGGGGGTGGCTCGAATGGTGGGGGGACTTTGCGCTGGGGACCCTCTGGTATGGGGAGTACAAGAACTATGGGGCCGGAGCAGAGCTGTCCGGGAGGGTGAAATGGCCGGGTTATCATGTGATTAGGGACCCTTCGCTAGCTTCTTTCTTCACGGTTGGGAGGTTCATTGACGGACGTTCGTGGCTGCCTGCAACCGGCATTAGGTTTCATGATGGTCTGAGTGCTTAA | 639 | 54.93 | MTFRNTAGPENFQAVALRVDSDQSAFFRCSIEGHQDSLYIHSLRQFYRECSISGTIDYIFGNGAAVLQNCKIFTGVPLTLQKVTITAQGRKNPHQSTGFTIQNSFIYASQPTYLGRPWKQYSRTVFLNTYMNELVQPRGWLEWWGDFALGTLWYGEYKNYGAGAELSGRVKWPGYHVIRDPSLASFFTVGRFIDGRSWLPATGIRFHDGLSA | 212 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7600164 | 7600802 | - | Bma021037.1 | Bma05g00270 | 82354 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00270 | 212 | ProSitePatterns | Pectinesterase signature 2. | 52 | 61 | IPR033131 | - | |
Bma05g00270 | 212 | SUPERFAMILY | Pectin lyase-like | 1 | 208 | IPR011050 | - | |
Bma05g00270 | 212 | PANTHER | PECTINESTERASE | 1 | 209 | - | - | |
Bma05g00270 | 212 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 22-RELATED | 1 | 209 | - | - | |
Bma05g00270 | 212 | Pfam | Pectinesterase | 1 | 195 | IPR000070 | GO:0030599|GO:0042545 | |
Bma05g00270 | 212 | Gene3D | - | 1 | 212 | IPR012334 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma05g00270 | Bma13g00619 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g00270 | Bma-Chr5:7600164 | Bma02g01157 | Bma-Chr2:53565311 | 2.10E-87 | dispersed | |
Bma05g00270 | Bma-Chr5:7600164 | Bma10g00665 | Bma-Chr10:9604969 | 5.37E-78 | transposed | |
Bma05g00270 | Bma-Chr5:7600164 | Bma10g00705 | Bma-Chr10:10678874 | 2.63E-78 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00270 | K01051 | - | tcc:18600505 | 388.267 |