Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00280 ATGGGTTTTCTTTTTAATAATATCTTCATCAGTTTCTTCATCATTTTCATGCCTTTTTGCTTCCAAAACACCCGCATTTTGATTGCTCAAGGACAGTGGATTGCAGGGAAGGACTTCCATGGGCTTCCCTTAAAGCAGCTTGATTTCATGGAGGAAAATGGCAGTGGAAATCAAAGGAGCAAGATAAAGAGAGTGGCTGGAGTTGACGAGAGTGAAGAAAAGGAGATTTTTATAGTTGAAAAGTTCAGAGCTTTACTTGGATTCAAAAGCCCATCAAATACTGACTCTGCAGAAAGTTTTTCTCCTTCACCTTCTCCACTGTCCGCCATTGAAGCTCCGGCTCCAGCTCCTATTCCATCCTTTCATACCCATAATCGTTCTCATCCTCCACTGCATCATTCTCGAGGGGCTAAAAATGGCCACACAGAACAACCCCAGAATGAAGATGAAGCCAATGTCAGAACTCTGGTTGCAGTTCTTGTCCCTACAGGAGCAGCCATTTTGATTTGTGCTCTTGGGTTCTTCTGGGTCTGCAAGAAATTCAGAAAAAAGAGAAAGAAATCCATGAGAACAATTTCAGTGACTGAAAAAAGAGTCAGAACGGCTGCCTCAAAGTGTGCTAATCCTCAGAAATCAGACAAGAACAAGGTAAGCTCAAATCATGGCCGTGATGATCTCTTTTATCTAAATTCACTAGAAATAGATTTGGAGCAACAAAATTCTTATCCTGTGAAAACCTCCTTAAATCATTACACACCTGAATTCAACAGCCAAGAAATTTTATATGCTGACAAATATAATCTGAGTAATTCTTCCTCGAAAGAAATTAAGTCCATCCATGAGGACCAAACAGAATCGATCAAATTCGAATCTGACTGCGATGATTCTTCATTTGCCGATAGAATTCTTTCGGTTGAAATGCATTTGTCGGACAGCGAATCATTCCATTCTTTGGTCGATTCACATTCATCAATGGCTCGCCTGTCAAATGCATCAAAGGCCAGCCATAGTGATGCATCAGAAATTTTAACTGAGAATGTGATAAACATGTCTCCCCGTCAACCAGAAACCACCAAAATTTTGATTTCTCAGCCTCCACCACCTCCCCCTCCACCTCCACCTCCACCTCCTCGGGTCTCTATTGCGAGCTTTTCATCTTCTCGATCCTCTCCTTATTCAACTAGAATAGGAAATAAAGCTTCATCTTCTTCCACATTGCCATATTTCTCATCACCATTGAAGTTGGATTCTTCTTCGGGATCCATTCCAACCCCGCGAAAGGATTTGACTTCTTCGATTAGAAAACAAACTAAGCAATCTCCGCCATCCCCACCGACTATTCCTCCACCACCCTGCCCGCCAGGAAATAATTTCTCTATCAAGACTCCACCGCCTCTCCCGTCTCAAATTCCTCATTTTGCACCACTGGGAAAAGATGGATCGCCACTTCCAAAACTCAAGCCACTTCATTGGGACAAAGTTAGAGCTACACCTGATCGTTCAATGGTGTGGGACAAGCTGCGTTCGAGCTCGTTTGAGCTAGACGAGGAAATGATAGAGTCGCTTTTCGGATACAATTTACAAAATTCAGCAAAGAATGACGATACGAAGAGCAAGAGCCCCTCCCCAAGCAAACATATACTCGAGCCAAAGAGACTCCAGAACTTAACCATACTCTTTAAAGCCTTAAATGTGACTGCAGAGCAAGTATGTGAAGCATTAGAACAAGGGAATGGCTTGAGATTAGCACAAATAGAAGCACTTGTAAAAATGGTACCAACCATGGAAGAAGAGGTGAAGCTATCGAGCTACAAAGGAAACTTTAACGATCTGGGATCTGCAGAGAGATTCGTGATAGTAGTTTTGAGAATTCCATTTGCCTTTCAGCGGGTCGAAGCCATGCTTTACCGTGAAACTTTCGAGGACGAGGTCGTTCATCTCAGAAACTCATTTTCAATGCTAGAGGATGCTTGCAAGGAACTAAGGTCTAGCAGGCTCTTCTTGAAGTTACTCGAAGCTGTGCTAAAAACGGGAAATCGTATGAACGTTGGAACAATCAGAGGAGGCGCAAAAGCGTTCAAACTAGATGCTCTCCTCAAACTGGCTGATGTGAAAGGAACAGATGGTAAAACCACTCTACTCCATTTTGTGGTTCAAGAAATAATTCGATCAGAAGGAATTAGAGTTTCCGAGAGCATAATGGGGAAAATCAGCCAGAAAAACAAAAGCAAAACGGCTCAAGAGAGGGAAGAATATTACAGAAAAATGGGTCTAGATCTTGTATCTGGTCTAAGCACAGAACTCTACAATGTGAAGAAAACAGCATCCGTAGACATGGATGTTCTCGCTACTTCAGTTTCATATCTCTCAGAAGGAATCGCAAAGTTACTACGTCTAGTACACAAGGATTTGTGCATCGATCAAAGAAGTGAAACTTTCATAAACTCGATGAAATCGTTTATAAATTATGGAGAGACTACCCTGAAAGAGTTGCAGGAAGATGAAAATAGAGTGCTCCTGAGAGTAAAAGAAATTACCGAGTATTTCCATGGCGATTTGAGCAGAGAGGAAGGAAACCCACTTCGAATCTTTGTGATAGTGAGAGATTTTCTGTGTATGTTGGATCATGTCTGTAAAGAGTTGAGAAGTTCGAAAGCTGGTCGGAGCCGGAGCCCTCTCGCTCCATTTGGATAG 2694 42.24 MGFLFNNIFISFFIIFMPFCFQNTRILIAQGQWIAGKDFHGLPLKQLDFMEENGSGNQRSKIKRVAGVDESEEKEIFIVEKFRALLGFKSPSNTDSAESFSPSPSPLSAIEAPAPAPIPSFHTHNRSHPPLHHSRGAKNGHTEQPQNEDEANVRTLVAVLVPTGAAILICALGFFWVCKKFRKKRKKSMRTISVTEKRVRTAASKCANPQKSDKNKVSSNHGRDDLFYLNSLEIDLEQQNSYPVKTSLNHYTPEFNSQEILYADKYNLSNSSSKEIKSIHEDQTESIKFESDCDDSSFADRILSVEMHLSDSESFHSLVDSHSSMARLSNASKASHSDASEILTENVINMSPRQPETTKILISQPPPPPPPPPPPPPRVSIASFSSSRSSPYSTRIGNKASSSSTLPYFSSPLKLDSSSGSIPTPRKDLTSSIRKQTKQSPPSPPTIPPPPCPPGNNFSIKTPPPLPSQIPHFAPLGKDGSPLPKLKPLHWDKVRATPDRSMVWDKLRSSSFELDEEMIESLFGYNLQNSAKNDDTKSKSPSPSKHILEPKRLQNLTILFKALNVTAEQVCEALEQGNGLRLAQIEALVKMVPTMEEEVKLSSYKGNFNDLGSAERFVIVVLRIPFAFQRVEAMLYRETFEDEVVHLRNSFSMLEDACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDALLKLADVKGTDGKTTLLHFVVQEIIRSEGIRVSESIMGKISQKNKSKTAQEREEYYRKMGLDLVSGLSTELYNVKKTASVDMDVLATSVSYLSEGIAKLLRLVHKDLCIDQRSETFINSMKSFINYGETTLKELQEDENRVLLRVKEITEYFHGDLSREEGNPLRIFVIVRDFLCMLDHVCKELRSSKAGRSRSPLAPFG 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7821108 7824085 + Bma021053.1 Bma05g00280 82364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00280 897 Pfam Formin Homology 2 Domain 480 874 IPR015425 -
Bma05g00280 897 MobiDBLite consensus disorder prediction 92 150 - -
Bma05g00280 897 MobiDBLite consensus disorder prediction 441 471 - -
Bma05g00280 897 ProSiteProfiles Formin homology-2 (FH2) domain profile. 476 897 IPR015425 -
Bma05g00280 897 SMART it6_source 476 889 IPR015425 -
Bma05g00280 897 SUPERFAMILY Formin homology 2 domain (FH2 domain) 489 884 - -
Bma05g00280 897 MobiDBLite consensus disorder prediction 92 106 - -
Bma05g00280 897 MobiDBLite consensus disorder prediction 358 485 - -
Bma05g00280 897 PANTHER FORMIN-LIKE PROTEIN 50 896 - -
Bma05g00280 897 MobiDBLite consensus disorder prediction 361 380 - -
Bma05g00280 897 MobiDBLite consensus disorder prediction 381 440 - -
Bma05g00280 897 Gene3D Formin, FH2 domain 499 891 IPR042201 -
Bma05g00280 897 PANTHER FORMIN-RELATED 50 896 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00280 Bma-Chr5:7821108 Bma03g01144 Bma-Chr3:15432441 7.00E-133 dispersed
Bma05g00280 Bma-Chr5:7821108 Bma03g01142 Bma-Chr3:15288285 5.10E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00280 - - qsu:112030660 929.472