Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00293 ATGGAAGATAGCACAGCGAGCTCAGAATCATCACCAACAAAATCACCCACAGACCACACTCACACTCACAACCACGTTCACTCCCATTCTGAAACCCAACTCCACCATAAAATCTTAAACTCCAATTCCTTCCTTTTAATCATCATTCCAATCACCATTTTCCTCATTCTCCTCGCCATAACTCTCGCCATTTTGTTTCTCCGACGACTCAAATCCGCCAGAAAGAGTGCAATTTGCAAAGAAAACGGCGGCATTCATCACTCGAGCAGCAGGCTCATTGCTCATACCACTATAATCGTCAATTCTAGCCCAGACGTGAACAGTGGTGGGTGTATGAACAAGGGAAGCCAAGGAAGAACAGCCCAAAGCAGATTAAAGGGAGTTCAAGTGTTCACATACAGAGAGCTGGAAGCAGCTACGGAGCAATTCAACGAGAGAAACGTGATTTGGAGAGAAGGAAAGGGTGAGGTGTACAGAGGGGTCTTAGGCGATGGGACAGTGGCCGCCATTAAAGCACTGCATCATCGGGAAGGGAAGCACAGAGAGCGTGCCTTTCGGATGGAGGTGGATCTACTGAGCCGGTTGCACTCTCCATGTCTGGTAGAATTACTAGGCTACTGCGCGGACCAAAACCACAGGCTTCTAGTCTTTGAATTCATGCAAAATGGCACCCTCCAAGGCAGCCTTCATCACCACAAGACTTTATCACAACCGTTGGGTTGGGGGACCCGGTTAAGGATTGCCCTTGATTGCGCCACGGCACTTGAATTTCTGCATGAACACACAGTTCCCACGGTGATTCATCGCGATTTCAAGTGCTCTAATGTTTTTCTCGATCAAAATTTTCAAGCCAAGGTGTCGGGATTTGGATCGGCCAAAATGGGATCTGATAAGATCAACGGTCAGATGTCAACCAACATGCCCGGGACCTCGGGATATCTCGCACCCGAGTATGCTTCAACAGGAAAACTAACAACAAAATCAGATGTATATAGCTATGGAGTTGTGCTGTTGGAGCTCTTGACTGGCCGCGTGCCTGTTGATATCAATCGCCCTCCAGGCCAACATGTTCTCGTCTCTTGGGCTCTTCCAAGATTAACAAATAGAGAGAAACTGATGGAAATGGTTGACACATCTATACAAGGACAGTACTCAAAGAAAGACTTAATTCAGATAGCAGCCATTGCGGCCATGTGTGTGCAGCCTGAAGCAGATTACAGGCCACTAATGACGGACGTGGTGCAGTCACTGATTCCTCTCGTCAAGAACTCATCTTCAATGGCTGCTTCAATGGCTTCCTCTGGTTCATCTAGATTCTTGATTCATACACCAAGTCCCAAGTTCTAA 1347 47.29 MEDSTASSESSPTKSPTDHTHTHNHVHSHSETQLHHKILNSNSFLLIIIPITIFLILLAITLAILFLRRLKSARKSAICKENGGIHHSSSRLIAHTTIIVNSSPDVNSGGCMNKGSQGRTAQSRLKGVQVFTYRELEAATEQFNERNVIWREGKGEVYRGVLGDGTVAAIKALHHREGKHRERAFRMEVDLLSRLHSPCLVELLGYCADQNHRLLVFEFMQNGTLQGSLHHHKTLSQPLGWGTRLRIALDCATALEFLHEHTVPTVIHRDFKCSNVFLDQNFQAKVSGFGSAKMGSDKINGQMSTNMPGTSGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDINRPPGQHVLVSWALPRLTNREKLMEMVDTSIQGQYSKKDLIQIAAIAAMCVQPEADYRPLMTDVVQSLIPLVKNSSSMAASMASSGSSRFLIHTPSPKF 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8598897 8602921 + Bma021080.1 Bma05g00293 82377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00293 448 CDD STKc_IRAK 155 420 - -
Bma05g00293 448 PANTHER OS01G0750732 PROTEIN 1 446 - -
Bma05g00293 448 Pfam Protein tyrosine and serine/threonine kinase 155 417 IPR001245 GO:0004672|GO:0006468
Bma05g00293 448 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 446 - -
Bma05g00293 448 MobiDBLite consensus disorder prediction 1 15 - -
Bma05g00293 448 ProSiteProfiles Protein kinase domain profile. 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00293 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bma05g00293 448 Gene3D Phosphorylase Kinase; domain 1 114 219 - -
Bma05g00293 448 SUPERFAMILY Protein kinase-like (PK-like) 122 417 IPR011009 -
Bma05g00293 448 Gene3D Transferase(Phosphotransferase) domain 1 220 437 - -
Bma05g00293 448 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00293 Bma-Chr5:8598897 Bma08g00556 Bma-Chr8:33652638 3.51E-137 dispersed
Bma05g00293 Bma-Chr5:8598897 Bma05g00298 Bma-Chr5:9014537 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66491 PF07714 PK_Tyr_Ser-Thr 1.40E-39 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00293 - - qlo:115980068 558.14