Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00413 ATGAGGAGGGATAAACTGAATGAGCAATATATTGAGCTTGGACAGGTTTTAGATCCTGATAGGCCTAAAAATGACAAAGGAACCATTCTTATGGATACTATTCAATTGCTGAAGGATCTGTCATCACAAGTTAATAAACTGAAAGCTGAATATGCTACACTGACAGAAGAATCACTGGAGTTGACACAGGAGAAAAATGATCTTAGAGAAGAGAAGGCATCTCTGAGATCGGATATTGAGAACCTTAATGCTCAGTATCAGCAGCGAATGAGGACAATGTTTCCTTGGCCTGCTATGGATCCCTCAGTTGTCATGGCTTCTTCCTCGTATCCATTTCCAGTGCCAATGCCGATGCCTCCCGGCTCGATTCCCATGCATCCGTCTATGCGGTCTTACTCCTTTTTTGGGAATCAAAATCCGGGGGTTATTACGAACCCCTGTTCGACATTTGTCCCATTTGTACCTTCTAATCCCTTAGCTGTACATCCTCCCACTCAATGTATTTTTCCCCTCGTTCATCCAGGCAGCCAACAAGATTCCAAGGGAGAAAGCAGGGTCGAGAGAAGCGTAGGGTCTAATGAAGTCGCCACAGACCTTGAGTTGAAGACTCCAGGATTGATGATTGATCAGGATTTATCTGTGAGACGCAGAAAAAGTAAGAAAACTATGAGCCAGGAAAACAGTGTTGCAGAATCGAGTTTTTCCAGTAGATGTTCTTCATGTCGGAGTGTACAAGATAGCTCTTCCAACAACAACATACGTGATGCTGTTAAGGCTAATGATGAACAAGAGAGGGAGACAAATAACAAGAACAGGTTTTTCTGA 825 43.15 MRRDKLNEQYIELGQVLDPDRPKNDKGTILMDTIQLLKDLSSQVNKLKAEYATLTEESLELTQEKNDLREEKASLRSDIENLNAQYQQRMRTMFPWPAMDPSVVMASSSYPFPVPMPMPPGSIPMHPSMRSYSFFGNQNPGVITNPCSTFVPFVPSNPLAVHPPTQCIFPLVHPGSQQDSKGESRVERSVGSNEVATDLELKTPGLMIDQDLSVRRRKSKKTMSQENSVAESSFSSRCSSCRSVQDSSSNNNIRDAVKANDEQERETNNKNRFF 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12971497 12973778 - Bma021251.1 Bma05g00413 82497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00413 274 MobiDBLite consensus disorder prediction 225 256 - -
Bma05g00413 274 MobiDBLite consensus disorder prediction 172 274 - -
Bma05g00413 274 PANTHER TRANSCRIPTION FACTOR BHLH121 1 253 IPR044579 GO:0003700|GO:0055072
Bma05g00413 274 MobiDBLite consensus disorder prediction 257 274 - -
Bma05g00413 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 58 IPR036638 GO:0046983
Bma05g00413 274 Coils Coil 30 92 - -
Bma05g00413 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 40 IPR011598 GO:0046983
Bma05g00413 274 PANTHER TRANSCRIPTION FACTOR BHLH121 1 253 - -
Bma05g00413 274 Gene3D - 1 69 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00413 Bma-Chr5:12971497 Bma12g00554 Bma-Chr12:23076784 5.17E-115 dispersed
Bma05g00413 Bma-Chr5:12971497 Bma14g00357 Bma-Chr14:4355988 8.97E-17 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00413 - - mnt:21407670 302.753