Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00457 ATGAACACTGCGCTGCCGGAAATGTTGCACTGTTTCACTGCCAATGGGAGCTCTACGGACACGACTGTCCTGGAGAGACAGAGAGGTCGCCGCAAATGGGAAGAAGAACGGCTACTAGAGCCGGAAAACAGTCTGAGTTCCTATGGTTGTTTTAATGAGTTTAGGAGCCTGTTTTCTTCTCCGATACCTGCGACCCAGGTCCAAAGCTTTCAGGGTTTGATGGGCAGAGCTGATTCAGCGCTGGGAGAGGTAGTAGTAGGCTCGTTAAAGCCCGACCCTGGCATGGATATCGTCTGGCCAGAGTTGGAGATGCCCAGTATGGAGTTCGGGTCGTCTGGCATGGTGAAAGGGAGTACTGAGCTGGAAGAGAGTTACTCTATTTCTAGAGCTTCCAACTGCAAACCTGCAATGGTGGCTCTGGCAGCCGGAGAGGTCAAACGTAAAGAATTAACGGAGAAGATGAACTTTGTCGCTGGAAGAGATAGCTTCAAGAAGAGGAAAGCTGAAAAGATACAAAATGCCATGGTTTCTTCTGGAGAAGACATCCGAGAGAAGAAGTTCAAATCCAGAGCAGAAGAAGCAGAATCGAAGATCACAGACCAAAACACCATTAAAACCAACAACAACAACAACAACAACAACACAGAAACCTCAGCCGACACTTCCAAAGAAAACAATTCAAAAGCTTCGGAGGTTCAAAAGCCAGACTACATCCATGTTCGAGCACGCCGAGGCCAAGCTACAGACAGCCACAGCCTCGCTGAAAGAGTGAGACGAGAGAAGATCAGCGAGAGAATGAGATATTTGCAGGATTTAGTCCCAGGATGCAACAAAATCACAGGCAAAACTGGAATGTTAGACGAAATCATCAACTACGTTCAATCTCTTCAACGCCAAGTAGAGTTTCTATCGATGAAATTAGCGTCCTTGAACCCCAGCCTTGACTTCAATGTTGATGAACTCTTTGCGAAAGAGGTATTTCAGTCTTGCCAATCGAGCTTTCCGAATGTAGGAGGAATTTCATCAGCAGCAAACAATTCAGCTTTCACACAGTTCAATCCATTACCACAAATGCTTCCCTGTTCTGCATTGGAAATGGCCATAACTCCCTCCGAAGTCGGCCTTCGTCGAACGATTAGCGCACCAGTTTCGTTTATCCCGGAAAGATTCATAGACTCTTCGTGCTTCGCAGGAAATCAGCCTCCTTCAACATGGAATGCGGATTTACAAAACGTTTACAACATTGTATTTGATCAAGGAAGATCAACAACTTTTCCATCTAACCCATATACAGGTTCCATGGAAGATAGTAGTCTAAAAATGGAGATGTGA 1332 45.87 MNTALPEMLHCFTANGSSTDTTVLERQRGRRKWEEERLLEPENSLSSYGCFNEFRSLFSSPIPATQVQSFQGLMGRADSALGEVVVGSLKPDPGMDIVWPELEMPSMEFGSSGMVKGSTELEESYSISRASNCKPAMVALAAGEVKRKELTEKMNFVAGRDSFKKRKAEKIQNAMVSSGEDIREKKFKSRAEEAESKITDQNTIKTNNNNNNNNTETSADTSKENNSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMRYLQDLVPGCNKITGKTGMLDEIINYVQSLQRQVEFLSMKLASLNPSLDFNVDELFAKEVFQSCQSSFPNVGGISSAANNSAFTQFNPLPQMLPCSALEMAITPSEVGLRRTISAPVSFIPERFIDSSCFAGNQPPSTWNADLQNVYNIVFDQGRSTTFPSNPYTGSMEDSSLKMEM 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15581208 15582972 - Bma021320.1 Bma05g00457 82541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00457 443 MobiDBLite consensus disorder prediction 167 235 - -
Bma05g00457 443 MobiDBLite consensus disorder prediction 179 199 - -
Bma05g00457 443 Pfam Helix-loop-helix DNA-binding domain 250 297 IPR011598 GO:0046983
Bma05g00457 443 Gene3D - 243 317 IPR036638 GO:0046983
Bma05g00457 443 SMART finulus 252 302 IPR011598 GO:0046983
Bma05g00457 443 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 19 424 IPR024097 GO:0006355
Bma05g00457 443 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 246 296 IPR011598 GO:0046983
Bma05g00457 443 MobiDBLite consensus disorder prediction 200 226 - -
Bma05g00457 443 CDD bHLH_AtBPE_like 236 321 - -
Bma05g00457 443 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 19 424 - -
Bma05g00457 443 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 244 315 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00457 Bma12g00509 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00457 Bma-Chr5:15581208 Bma12g00509 Bma-Chr12:16505688 6.57E-130 dispersed
Bma06g00810 Bma-Chr6:41583850 Bma05g00457 Bma-Chr5:15581208 1.74E-32 dispersed
Bma08g00318 Bma-Chr8:4767107 Bma05g00457 Bma-Chr5:15581208 1.85E-17 dispersed
Bma10g00191 Bma-Chr10:1706177 Bma05g00457 Bma-Chr5:15581208 9.87E-44 dispersed
Bma05g00457 Bma-Chr5:15581208 Bma03g00554 Bma-Chr3:4562973 9.44E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57312 PF00010 HLH 4.20E-05 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00457 - - jre:109013802 479.174