Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00474 ATAGAGTTTCTTCTCCTTTCAACATTTATTTTCATGAACACAGGAGGTGAATACTACAATGGTTATGGACAAAATCAGATTCCCAATCTTAAAACTCCACCTGGTGCTGTTTTCGGAGAATGGACACCACCCGCAGCACCGCCTCCGCCGCCCCATCTAAGCAGTGAATTAAGCTCCAATTTCTCAGGCTCGGGCTCACAAGGACCGCCCTTGCCTCCTCCGCACCCAACTGTGGCACTTGGCTTCAACAAGAGCACCTTCACTTACGATGAGCTAGTGTCTGCAACAGGAGGGTTCTCAGTGGCTAACCTCTTGGGTCAAGGTGGCTTTGGCTATGTCCACAAAGGTGTCCTTCCAAATGGAAAGGAAATTGCAGTGAAGAGTCTTAAGTTGGGAAGTGGTCAAGGCGAGCGGGAATTCCAGGCTGAGGTCGAGATTATTAGCCGCGTTCATCATCGACACCTCGTCTCCCTCGTCGGGTATTGCATTGCCGGTGGAAGAAAGATGTTGGTCTATGAATTTGTTCCCAATAATAACCTTGAATTCCACCTTCACGGGAAGGATCGCCCTCCAATGGATTGGGCTACTAGAGTCAAGATTGCTTTAGGGTCTGCTAAAGGCCTTGCCTACCTGCATGAAGACTGTCACCCGCGCATCATTCATCGAGACATAAAATCTGCAAATATTCTTATCGATTACAGTTTTGAAGCCAAGGTGGCTGATTTCGGATTGGCGAAGCTAAATCAAGACAACAGCACTCACGTATCGACTCGTGTCATGGGGACTTTCGGATACTTGGCTCCTGAATATGCATCAAGCGGAAAGCTAACTGAGAAATCCGATGTTTTCTCATACGGTGTTATGCTCTTAGAACTCATAACCGGAAGGCGCCCGGTGGACCTCACTGGTGTCATGGAGGACAGCTTAGTAGACTGGGCAAGGCCTTTTTGTGCTCAGGCAATGACTGATGGAGACTTCCACGAGTTGGTCGATCCGCGATTGGAACAAAACTTTATGCATCACGAAATGGCACGAATGGTCGCCTGCGCTGGTGCTTGCGTCCGACATTCTGCAAGGAGGCGCCCAAAAATGAGCCAGATTGTGAGGGCACTGGAAGGAGATGTTTCGCTCGAAGATCTAAACGAGGGGGTGAAACCAGGCCAGAGTTCATACTTCAGCTCAAGCACATCAGATTATGATGGAGGCTCGTACAGCGCAAACATGAAGAAGTTCAAGAAGGTGGCATTGAACAGCAATGAATACACGAGCAGCGAGTATGGAATGACGAGCGAATACGGGCTCAACCCGTCGTCTTCGAGCAGCGACTCCCAAGAAATGAGCATCAAAGGAAGCCGCCCAAACAGTCCTTGA 1371 49.23 IEFLLLSTFIFMNTGGEYYNGYGQNQIPNLKTPPGAVFGEWTPPAAPPPPPHLSSELSSNFSGSGSQGPPLPPPHPTVALGFNKSTFTYDELVSATGGFSVANLLGQGGFGYVHKGVLPNGKEIAVKSLKLGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGRKMLVYEFVPNNNLEFHLHGKDRPPMDWATRVKIALGSAKGLAYLHEDCHPRIIHRDIKSANILIDYSFEAKVADFGLAKLNQDNSTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDLTGVMEDSLVDWARPFCAQAMTDGDFHELVDPRLEQNFMHHEMARMVACAGACVRHSARRRPKMSQIVRALEGDVSLEDLNEGVKPGQSSYFSSSTSDYDGGSYSANMKKFKKVALNSNEYTSSEYGMTSEYGLNPSSSSSDSQEMSIKGSRPNSP 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17633591 17635678 - Bma021367.1 Bma05g00474 82558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00474 456 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Bma05g00474 456 SUPERFAMILY Protein kinase-like (PK-like) 75 371 IPR011009 -
Bma05g00474 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bma05g00474 456 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 25 431 - -
Bma05g00474 456 MobiDBLite consensus disorder prediction 39 76 - -
Bma05g00474 456 MobiDBLite consensus disorder prediction 425 456 - -
Bma05g00474 456 MobiDBLite consensus disorder prediction 40 54 - -
Bma05g00474 456 Gene3D Transferase(Phosphotransferase) domain 1 175 384 - -
Bma05g00474 456 ProSiteProfiles Protein kinase domain profile. 99 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00474 456 SMART serkin_6 99 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00474 456 Pfam Protein tyrosine and serine/threonine kinase 102 371 IPR001245 GO:0004672|GO:0006468
Bma05g00474 456 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 25 431 - -
Bma05g00474 456 Gene3D Phosphorylase Kinase; domain 1 76 174 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00474 Bma12g00444 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00474 Bma-Chr5:17633591 Bma15g01003 Bma-Chr15:38971692 0 dispersed
Bma10g00748 Bma-Chr10:11821441 Bma05g00474 Bma-Chr5:17633591 3.66E-70 dispersed
Bma12g00444 Bma-Chr12:11231440 Bma05g00474 Bma-Chr5:17633591 3.21E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66496 PF07714 PK_Tyr_Ser-Thr 3.20E-48 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00474 - - jre:109011195 630.943