Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00489 ATGGCCGCTTCCCTCCTTCGCTTGCATTTCCACGATTGTCTAGTAAATGGATGTGATGGGTCAGTGCTGCTTGATGATACGTCAGATATGAAGGGGGAGAAGAACGCTGGGCCAAACACAGGAGGGCCTTACTGGAATGTTCCATTAGGACGTAGAGATGGGTTGACAGCAAGTGCTGGAGCTGCTAATCAACAGTTGCCGTCTCCATTTGAGTCTTTGGCTGCTATTGTTAAGAAGTTTACTTCAAAGGGTCTCGACATGAAGGATGTCGTCGTCCTCTCAGGAGGACATACAATAGGGTTTGCTCAATGTTTCACCTTCAAGAGGAGGCTGTTTAACTTCAAAGGTTCAGGCGAAGCAGACCCAGATCTGGATTCTTCACTTCTTTCCGATCTCAGAACAGCTTGTCCAAACAGTGACTCAGCCAACTCAAACGTGGCTCCCCTAGACTCTACTAGTACTTACAGGTTCGACAACATGTACTACACAACTCTTGTGAACAACACCGGACTTCTCGAATCTGATCAGGCCCTCATGTCGGACCCTAGAACTGCTGTCTTAGTGCAGTCTTACAGCTCCAATCCATTCCTTTTCTCCAAGGATTTTGCTGCTTCCATGGTGAAACTTGGCAATGTGGGGATCCTCACTGCTTTTGATGGGGAAATAAGAAAGAGATGTGGGTCTGTTAACTAA 693 47.04 MAASLLRLHFHDCLVNGCDGSVLLDDTSDMKGEKNAGPNTGGPYWNVPLGRRDGLTASAGAANQQLPSPFESLAAIVKKFTSKGLDMKDVVVLSGGHTIGFAQCFTFKRRLFNFKGSGEADPDLDSSLLSDLRTACPNSDSANSNVAPLDSTSTYRFDNMYYTTLVNNTGLLESDQALMSDPRTAVLVQSYSSNPFLFSKDFAASMVKLGNVGILTAFDGEIRKRCGSVN 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21388261 21389665 - Bma021411.1 Bma05g00489 82573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00489 230 CDD secretory_peroxidase 1 229 IPR033905 GO:0004601|GO:0042744
Bma05g00489 230 ProSitePatterns Peroxidases proximal heme-ligand signature. 89 99 IPR019793 -
Bma05g00489 230 PANTHER PEROXIDASE 10 40 229 - -
Bma05g00489 230 Gene3D - 41 230 - -
Bma05g00489 230 ProSiteProfiles Plant heme peroxidase family profile. 1 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Bma05g00489 230 Pfam Peroxidase 39 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 Gene3D - 1 40 - -
Bma05g00489 230 PRINTS Haem peroxidase superfamily signature 150 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PRINTS Haem peroxidase superfamily signature 41 53 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PRINTS Haem peroxidase superfamily signature 89 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PRINTS Plant peroxidase signature 164 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PRINTS Plant peroxidase signature 204 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 Gene3D Peroxidase, domain 2 67 209 - -
Bma05g00489 230 PANTHER PEROXIDASE 10 1 40 - -
Bma05g00489 230 SUPERFAMILY Heme-dependent peroxidases 1 230 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PANTHER PEROXIDASE 72-RELATED 40 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma05g00489 230 PANTHER PEROXIDASE 72-RELATED 1 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00489 Bma-Chr5:21388261 Bma15g00880 Bma-Chr15:29396588 6.22E-108 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00489 K00430 - fve:101309307 345.51