Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00507 | ATGGCGATTGTTAAAAGTGAAGAAACAGAAGAAGAGAGACAGAAGAGTTTGTTCTTTTTAGACTCTCTCTACTGTTACGAAGAGAGATGGGAGGAAGACGAAGACGAAGACGAAGAAGATGATGAATGTGAAAAGAGTTCAGAAGAAGAAGAAGAAGAGCTTCTCTCTCTAATCTCCAAAGAAGAAGAAGAACACCGACGTCCGATTGTTGAAAATTTCAAATGTGATGCAGTTCTGTGTTGGGCTCGCTCTGAGGCTGTGAAGTTGATTCTAAAAGTTAAAAACCAGTTTGGATTCTCAGCTTTGACCGCCATTTTAGCCATCGACTACCTCGATCGTTTCTTGTCTAGTCTGCAGTTTCAGAGAGAGAAGCCATGGATGAGTCAACTCGTTGCTGTTGCTTGCCTCTCACTTGCAGCGAAAGTGGAAGAAACCCAAGTCCCTCTTCTTCTCGATCTTCAAGTAGAGGAGACAGAATTTGTTTTTGAAGGGAAGACGGTTCAGAGAATGGAGCTTCTTGTTCTTTTTGCTCTTCAATGGCGGATGCATCCAGTAACTCCATATTCATTTATGAATCTCATCGCCGGAAAGATCGGATTAAAGACCAATTTATATCATGAATTTCTTAGTCTTTTCGATAGTCTTCTTCTCTCACTTCTCGCAGATTCAAGATCTGTGAGTTATCTTCCTTCTGCCATGGCTGCCCCTGCAATGGTGAGAGTTTTAGAGGAGATAGAGGCCCGTAAATCAATGGAGTACAAGAATCAGATTCTGGGTGTTCTTAAAATGAGCAAAGATAATTTAAGTGACTGTTACAGTCTGATACTTGAGCTGTCGAACGCCGATTTCAATGGCGGTAAAACCTCCGTAAGGAGAAGATTCTATCAAGGTCCGGGGAGGCTGAATGGAGTCGCCGATGCGGTTTTTAGCTCCGACTGCTCTAATGATTCCTGGTCTGTGCTTTCTTCCCCCGTTTCTCCAATCGTAGAACCGTCATTGAAGAAAAGCAGAGCTCAAAATCAAATGGCGAAATTTCCATCCTTGATTACTTGA | 1053 | 42.64 | MAIVKSEETEEERQKSLFFLDSLYCYEERWEEDEDEDEEDDECEKSSEEEEEELLSLISKEEEEHRRPIVENFKCDAVLCWARSEAVKLILKVKNQFGFSALTAILAIDYLDRFLSSLQFQREKPWMSQLVAVACLSLAAKVEETQVPLLLDLQVEETEFVFEGKTVQRMELLVLFALQWRMHPVTPYSFMNLIAGKIGLKTNLYHEFLSLFDSLLLSLLADSRSVSYLPSAMAAPAMVRVLEEIEARKSMEYKNQILGVLKMSKDNLSDCYSLILELSNADFNGGKTSVRRRFYQGPGRLNGVADAVFSSDCSNDSWSVLSSPVSPIVEPSLKKSRAQNQMAKFPSLIT | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 23314540 | 23316540 | - | Bma021439.1 | Bma05g00507 | 82591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00507 | 350 | SMART | cyclin_7 | 88 | 176 | IPR013763 | - | |
Bma05g00507 | 350 | SMART | Cyclin_C_2 | 185 | 312 | IPR004367 | - | |
Bma05g00507 | 350 | PANTHER | CYCLINS | 48 | 336 | IPR039361 | - | |
Bma05g00507 | 350 | Pfam | Cyclin, C-terminal domain | 185 | 292 | IPR004367 | - | |
Bma05g00507 | 350 | PANTHER | CYCLIN D3.1 PROTEIN | 48 | 336 | - | - | |
Bma05g00507 | 350 | Gene3D | - | 69 | 183 | - | - | |
Bma05g00507 | 350 | Pfam | Cyclin, N-terminal domain | 81 | 182 | IPR006671 | - | |
Bma05g00507 | 350 | CDD | CYCLIN | 83 | 175 | IPR013763 | - | |
Bma05g00507 | 350 | Coils | Coil | 44 | 64 | - | - | |
Bma05g00507 | 350 | Gene3D | - | 62 | 273 | - | - | |
Bma05g00507 | 350 | SUPERFAMILY | Cyclin-like | 47 | 183 | IPR036915 | - | |
Bma05g00507 | 350 | MobiDBLite | consensus disorder prediction | 30 | 49 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma03g00530 | Bma05g00507 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g00507 | Bma-Chr5:23314540 | Bma01g00471 | Bma-Chr1:3888163 | 1.35E-90 | dispersed | |
Bma05g00507 | Bma-Chr5:23314540 | Bma05g00508 | Bma-Chr5:23352071 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00507 | K14505 | - | vvi:100264093 | 306.99 |