Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00507 ATGGCGATTGTTAAAAGTGAAGAAACAGAAGAAGAGAGACAGAAGAGTTTGTTCTTTTTAGACTCTCTCTACTGTTACGAAGAGAGATGGGAGGAAGACGAAGACGAAGACGAAGAAGATGATGAATGTGAAAAGAGTTCAGAAGAAGAAGAAGAAGAGCTTCTCTCTCTAATCTCCAAAGAAGAAGAAGAACACCGACGTCCGATTGTTGAAAATTTCAAATGTGATGCAGTTCTGTGTTGGGCTCGCTCTGAGGCTGTGAAGTTGATTCTAAAAGTTAAAAACCAGTTTGGATTCTCAGCTTTGACCGCCATTTTAGCCATCGACTACCTCGATCGTTTCTTGTCTAGTCTGCAGTTTCAGAGAGAGAAGCCATGGATGAGTCAACTCGTTGCTGTTGCTTGCCTCTCACTTGCAGCGAAAGTGGAAGAAACCCAAGTCCCTCTTCTTCTCGATCTTCAAGTAGAGGAGACAGAATTTGTTTTTGAAGGGAAGACGGTTCAGAGAATGGAGCTTCTTGTTCTTTTTGCTCTTCAATGGCGGATGCATCCAGTAACTCCATATTCATTTATGAATCTCATCGCCGGAAAGATCGGATTAAAGACCAATTTATATCATGAATTTCTTAGTCTTTTCGATAGTCTTCTTCTCTCACTTCTCGCAGATTCAAGATCTGTGAGTTATCTTCCTTCTGCCATGGCTGCCCCTGCAATGGTGAGAGTTTTAGAGGAGATAGAGGCCCGTAAATCAATGGAGTACAAGAATCAGATTCTGGGTGTTCTTAAAATGAGCAAAGATAATTTAAGTGACTGTTACAGTCTGATACTTGAGCTGTCGAACGCCGATTTCAATGGCGGTAAAACCTCCGTAAGGAGAAGATTCTATCAAGGTCCGGGGAGGCTGAATGGAGTCGCCGATGCGGTTTTTAGCTCCGACTGCTCTAATGATTCCTGGTCTGTGCTTTCTTCCCCCGTTTCTCCAATCGTAGAACCGTCATTGAAGAAAAGCAGAGCTCAAAATCAAATGGCGAAATTTCCATCCTTGATTACTTGA 1053 42.64 MAIVKSEETEEERQKSLFFLDSLYCYEERWEEDEDEDEEDDECEKSSEEEEEELLSLISKEEEEHRRPIVENFKCDAVLCWARSEAVKLILKVKNQFGFSALTAILAIDYLDRFLSSLQFQREKPWMSQLVAVACLSLAAKVEETQVPLLLDLQVEETEFVFEGKTVQRMELLVLFALQWRMHPVTPYSFMNLIAGKIGLKTNLYHEFLSLFDSLLLSLLADSRSVSYLPSAMAAPAMVRVLEEIEARKSMEYKNQILGVLKMSKDNLSDCYSLILELSNADFNGGKTSVRRRFYQGPGRLNGVADAVFSSDCSNDSWSVLSSPVSPIVEPSLKKSRAQNQMAKFPSLIT 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23314540 23316540 - Bma021439.1 Bma05g00507 82591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00507 350 SMART cyclin_7 88 176 IPR013763 -
Bma05g00507 350 SMART Cyclin_C_2 185 312 IPR004367 -
Bma05g00507 350 PANTHER CYCLINS 48 336 IPR039361 -
Bma05g00507 350 Pfam Cyclin, C-terminal domain 185 292 IPR004367 -
Bma05g00507 350 PANTHER CYCLIN D3.1 PROTEIN 48 336 - -
Bma05g00507 350 Gene3D - 69 183 - -
Bma05g00507 350 Pfam Cyclin, N-terminal domain 81 182 IPR006671 -
Bma05g00507 350 CDD CYCLIN 83 175 IPR013763 -
Bma05g00507 350 Coils Coil 44 64 - -
Bma05g00507 350 Gene3D - 62 273 - -
Bma05g00507 350 SUPERFAMILY Cyclin-like 47 183 IPR036915 -
Bma05g00507 350 MobiDBLite consensus disorder prediction 30 49 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00530 Bma05g00507 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00507 Bma-Chr5:23314540 Bma01g00471 Bma-Chr1:3888163 1.35E-90 dispersed
Bma05g00507 Bma-Chr5:23314540 Bma05g00508 Bma-Chr5:23352071 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00507 K14505 - vvi:100264093 306.99