Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00513 GCCTTGACCATGGAGTTATTTGGAACTTCATTTCTGCTGGGTTTCATTTTATTTCTTGCAATGCTGCTACCTCAGATAATGGCAGGCTGCCCTTTGGATTTGATTCCATCAAATTTTACTCTAGTGGCCTCTATGTGCAAAAATAATGGTGACAGAGGAAAGTGCTGTCGCTATATTAATGCCATTATTGCAGTTTCTGTTGCTCATTATGCAAATGAAACAAACAATCTTGGGGTTCCTTCTGATTTTTCTGAATCCTGCCTTGAGTCTATTTTGCACACCATGGTGCTATATGGAGTTCCACGAAACGCAACAGCATTTTGTGGATTTGGAACAAAGATTTCAGTCAACTACGAGTGCAAGGGACGAACGGCTGTCACGCAAATGCTGCAATCTGCAGATTTTCCGGATGTTATTGAAAATTGCAAAATGCCACTGTCCGAAGACACCAAGTGTAGATCGTGTATAAATTCTTCCATGGTTTTCCTTCGTCATATTGTTGGAATTGATGATAACATAACGTTGAGTACATGTCGTGATGCCACGTTTGTCTCTCTTGTTAGTCAAGTAGATCCTGATTCAGCTGCTGAGTTTGCCAACTGTTTCTTTGGAGTTCAAGGGCTAAACATGCATACAGAGCCGTCCCCGAATTTGGTGACCCCAGACGTTTCTCCAAGTCCTTTTGATGCTGCAAGCCCAAGCCAACAATTGTTATGCATACCCATTTCGCAAAAGCACCATTCCTACCATCTGACTCTAGTCCCAGGCATTGGCATTGCAGTTACAGCATTTTCTGTTCTGATGTTGCTGGTCTTGATAGCGCTGGTACGTAGGAAAAGCAGACAATTAGATGATTCCGAGAATGCAGATTTCACATCGTCAAAAACCTTCTCTGTTCCTCGGACTGTCCAAAAAATTCAAGAAGGTAGTTTTATGTTTCAAAAGTTCAGCTACAAGGACATAAAGAAAGCTACAGAAAATTTTGGAAATGAAATTGGTCGTGGAGGATTTGGGACTACATACAAGGCTCAGTTTGAGGATGGTTTAGTGGCAGCAGTGAAGAGGATAAACAAAGTGTTGGGGCAGGGGGAAAATGACTTCTGTAGAGAGATAGAGCTTCTTGCTAGATTACATCATCGCCACCTTGTTGCTCTAAGAGGCTTTTCCATCGGAAAACACGAGAGGTTTCTCATTTATGAGTACATGGCAAATGGAAGTTTGACTGATCATCTTCACTCGATCAGTAAAAATCCATTAAGTTGGCAGACGAGAATACAAATCGCCATAGACGTGGCCAATGCTCTGGAGTACCTGCATTTTTATTGCGATCCTCCTCTGTGCCATAGAGACATCAAGTCCAGTAACATCTTACTTGATGAATATTTTGTTGCCAAGGTTGCAGATTTTGGCCTTGCTCATGCTTCAAAAGATGGTTCTGTGTGCTTTGAACCAGTAAATAATGATGTCCAGGGAACACCTGGTTACATTGATCCTGAGTATGTTGTCACTCAAGAACTTACCGAGAAAAGTGATGTATACAGCTATGGTGTTCTACTCTTGGAGATAGTCACCGGAAGACTAGCTATACTAGACGGCAAAAGTTTGGTAGAATGGTCACACTTTTACATGCAATCGGAAACAACTCTACCCGATCTAGTGGATCCGAGAATCAAGGATTCCTTCGACTTGGAACAGCTTCATGCAGTTGTTTCGATAGTAAAATGGTGTACGCATGGAGAAGGAAGGGACAGGCCATCAATTAAGCAGGTCATTCGGCTTTTGTACGATAGTTCAGATCCAATGCAAAGTGGGTTTATCGACATAATGGACGATGAAGACTATGAGCATGTGGAAGGAAGAGAGAGAACTAGTAGAGGTAAAATGCATAGTGGAGATGTAAGATGCCTCGCTTCGTCTTCTAGTACTTCAAGATCTCATTGTAGTAGAAGCTTTCTGCTTGAAACCAGCTCTTCTCATTCCCCTTCTTAA 1989 42.08 ALTMELFGTSFLLGFILFLAMLLPQIMAGCPLDLIPSNFTLVASMCKNNGDRGKCCRYINAIIAVSVAHYANETNNLGVPSDFSESCLESILHTMVLYGVPRNATAFCGFGTKISVNYECKGRTAVTQMLQSADFPDVIENCKMPLSEDTKCRSCINSSMVFLRHIVGIDDNITLSTCRDATFVSLVSQVDPDSAAEFANCFFGVQGLNMHTEPSPNLVTPDVSPSPFDAASPSQQLLCIPISQKHHSYHLTLVPGIGIAVTAFSVLMLLVLIALVRRKSRQLDDSENADFTSSKTFSVPRTVQKIQEGSFMFQKFSYKDIKKATENFGNEIGRGGFGTTYKAQFEDGLVAAVKRINKVLGQGENDFCREIELLARLHHRHLVALRGFSIGKHERFLIYEYMANGSLTDHLHSISKNPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEYFVAKVADFGLAHASKDGSVCFEPVNNDVQGTPGYIDPEYVVTQELTEKSDVYSYGVLLLEIVTGRLAILDGKSLVEWSHFYMQSETTLPDLVDPRIKDSFDLEQLHAVVSIVKWCTHGEGRDRPSIKQVIRLLYDSSDPMQSGFIDIMDDEDYEHVEGRERTSRGKMHSGDVRCLASSSSTSRSHCSRSFLLETSSSHSPS 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25441025 25445073 + Bma021456.1 Bma05g00513 82597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00513 662 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Bma05g00513 662 ProSiteProfiles Protein kinase domain profile. 326 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00513 662 Pfam SPARK 29 172 IPR043891 -
Bma05g00513 662 Gene3D Phosphorylase Kinase; domain 1 290 401 - -
Bma05g00513 662 SUPERFAMILY Protein kinase-like (PK-like) 307 595 IPR011009 -
Bma05g00513 662 PANTHER OS01G0750732 PROTEIN 10 662 - -
Bma05g00513 662 MobiDBLite consensus disorder prediction 618 662 - -
Bma05g00513 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Bma05g00513 662 SMART serkin_6 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00513 662 CDD STKc_IRAK 332 594 - -
Bma05g00513 662 Gene3D Transferase(Phosphotransferase) domain 1 402 612 - -
Bma05g00513 662 Pfam Protein kinase domain 329 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00513 662 PANTHER BNAC06G02630D PROTEIN 10 662 - -
Bma05g00513 662 MobiDBLite consensus disorder prediction 634 662 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00513 Bma-Chr5:25441025 Bma03g01561 Bma-Chr3:51976003 2.43E-70 dispersed
Bma14g00376 Bma-Chr14:4526917 Bma05g00513 Bma-Chr5:25441025 4.54E-52 dispersed
Bma05g00513 Bma-Chr5:25441025 Bma12g00444 Bma-Chr12:11231440 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66498 PF00069 Pkinase 2.20E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00513 - - jcu:105639495 921.383