Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00514 ATGGGTATATCTGTAAATCATAGGGGCTCGAGAGCTGGGACGAATCAGGACGGTTTGCCCGTAAAAAATGAGTTTCTTCCGACGGCGACGCAGAAGAAATGGACTAATCTGATGCCTTTAGTCGTAGCCCTTGTTGTGTTTGCAGAAATTGCCTTTCTGGGTCGCCTCGACTTGGCTAAAAACAGTGCCTTGGTCGATTCCTGGGCCGACCTGTTCTATCAGTCGCCTTCGTCGCGGGAGGCGTTGCTGGGAGTTGATGATTTTAATTATGGATCTATTGTTGGCGATGAGATTGTAGAATTTGAGAGCTGCGAGTATTGGTTAGAGAAAGAAGACGCTGTTGTGTATTCTAGGGATTTTGAAAACGAACCCATCTTTGTTTCTGGTGGTGAGAAGGAGTGGAGATCATGTGCAGTGGGATGTGAATTTGGATCAATTCCTAGTAAGAAGCCTGATGCTGCATTTGGTTTACATGGTGGACCAAATAGTATACTCCGTTCCATGGAATCGGCCCAGTACTATGCAGAGAACAATATTGCAATTGCACGACGGAAAGGTTATAGTATTATAATGACCACCAGTCTCTCGTCAGATGTTCCCGTCGGATATTTTTCGTGGGCGGAGTATGATATCATGGCCCCAGTACAACAAAAGACTGAGACATCTCTTGCAGCTGCTTTTATTTCAAATTGTGGTGCTCGTAACTTTCGGTTGGAAGCTCTGGAGGCTCTTGAAAAGTTGAACATCAAGATTGATTCGTATGGTGGTTGCCACAGGAACCGTGACGGAAGAGGAACAATTCCCGTGGTGGTTGGGGCTCCAAATATAGAAGATTTTGCTCCTTATCCTGGTTCAATTTTACATATCAAGGAGCCTTCAGATGTTGAGCCAGTTGCAAAAGCCATGAAATATCTTTCAGAAAATCCAGATGTATATAACCAGTCATTGAGATGGAAATATGAAGGTCCATCTGATTCATTCAAGGCCCTAGTGGATATGGCAGCAGTTCACTCATCATGCCGGCTTTGCATTCACTTGGCGACATCCATTCGGGATAAAGAAGAAAAGAGGCCTGGCTTTAAGAAACGTCCTTGCAGGTGTACGAGAGGCTCAGAAACCGTGTACCATTTATACGTCAGAGAAAGAGGGAGGTTTGATTTTGAGTCTATTTTCTTAAGGTCTGGAAATTTGACGCTGGCGGCTCTCGAGTCGGCGGTGCTCGAAAAGTTCAGTTCTAAAAAGCATATTCCAATATGGAAGGAGGAAAGACCGGAAAGCATAAGAGGCGGGGATGAACTGAAAGTGTATAGAATATATCCTCTTGGGTTGACTCAAAGACAGGCATTGTATAGCTTCAGACTAAAAGGGGATTCTGATCTGAGAAATCACGTGGAGAGCCATCCCTGTGCAAAGCTTGAAGTCATCTTTGTTTAG 1434 44.63 MGISVNHRGSRAGTNQDGLPVKNEFLPTATQKKWTNLMPLVVALVVFAEIAFLGRLDLAKNSALVDSWADLFYQSPSSREALLGVDDFNYGSIVGDEIVEFESCEYWLEKEDAVVYSRDFENEPIFVSGGEKEWRSCAVGCEFGSIPSKKPDAAFGLHGGPNSILRSMESAQYYAENNIAIARRKGYSIIMTTSLSSDVPVGYFSWAEYDIMAPVQQKTETSLAAAFISNCGARNFRLEALEALEKLNIKIDSYGGCHRNRDGRGTIPVVVGAPNIEDFAPYPGSILHIKEPSDVEPVAKAMKYLSENPDVYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATSIRDKEEKRPGFKKRPCRCTRGSETVYHLYVRERGRFDFESIFLRSGNLTLAALESAVLEKFSSKKHIPIWKEERPESIRGGDELKVYRIYPLGLTQRQALYSFRLKGDSDLRNHVESHPCAKLEVIFV 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25445802 25449550 - Bma021457.2 Bma05g00514 82598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00514 477 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 265 454 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bma05g00514 477 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 116 352 - -
Bma05g00514 477 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 264 351 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bma05g00514 477 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 265 454 - -
Bma05g00514 477 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 36 264 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bma05g00514 477 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 36 264 - -
Bma05g00514 477 Gene3D - 264 326 IPR038577 -
Bma05g00514 477 Gene3D - 168 263 IPR038577 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00514 Bma-Chr5:25445802 Bma12g00448 Bma-Chr12:11296475 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00514 K00753 - zju:107427081 713.761