Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00545 ATGGATTGGAGAAGTGGAATGTGTGTTCTGGTGATTGTGTTTGTGGGAATGATCGGTGATGGCGTCGTGGCAGAGGCAAAGACTAAGGTCCATATTGTGTATTTGGGAGAGAGGCAGCACAACGATCCGGAGCTCGTCAGTCACTCGCATCATCTGCTGCTGGCCAAATTGCTCGGAAGCAAGGAGAAGGCTGAGGAATCCATGGTTTACAGTTACAGACATGGCTTTTCTGGGTTTGCAGCCAAGCTTACAGAGTCGCAGGCGGAGAAGCTGTCAGAAATGGCTGGTGTTCATTTCGTCATACCGAGCAGCATTTACAAGCTTCAAACAACTAGGAGCTGGGATTTTCTCCATCTTTCTTCTGATTCTCATTCCGATCTTCTTCAAACTAGCAACCTCGGAAGTGATGTAATTATAGGCGTTCTCGACACTGGAATATCGCCGGAGTCTAGATCGTTCAATGAAAGTGGTCTAGGGCCAATCCCATTGCGATGGAAAGGTGGGTGTGATTCAGGGGACCAATTCGACCCTCTAACCGACTGCAATCGGAAAATCATCGGAGCCAGGTGGTACGTCGACGGACTCACTGAAGAATATGGGCACCCATTAAACACCTCCGAAATCGTAGAATTCTTCTCTCCGAGGGACGCCAATGGGCATGGCACCCACGTCGCCAGCACGGCTGCTGGCTCTTTTGTCTCCAACGTTAGCTACAACGGCCTGGCTGCCGGCATAGCGAGAGGTGGCGCCCCCAACGCGCGCTTGGCCATCTACAAGGTTTGTTGGAATATCGACGGAGGTCAATGCGGGACCGCCGACATACTCAAGGGTATTGACGAGGCCATTCACGACGGCGTTGATGTGTTGTCTCTATCTCTCGGCCAATCGGCTCCTCTATTCTCCGAGGTCGATCATCGTAACACCATTGCCATCGGTTCCTTCCATGCCGTCGCTAGAGGCATCACCGTTGTTTGTGCCGGAGGAAACGAAGGGCCTTCTGCTCTTTCCGTCGCCAACACGGCCCCTTGGATCATAACCGTCGCTGCCTGCACCGTTGATCGGACGTTTCCGACTACCATTACCCTAAGAAACAACGACATTTTGACGGGTCAAGCTTTGTTCTCCGGCGCCGAGATCGATTTCACAGGCTTGTACTTCCCGGAATCCAACGGCGTAGACCCCAATGCTAACAGCGTTTGTGAATCTCTTTCACTCAATGAAACTCTGGTGGCCGGAAAGGTGGTTCTCTGCTTCACTTCAACCGCTCGCAATTCGGCCGTAGCTTCCGCCCAAGCAGCCGTGAAAGCTGCAGGTGGCGTTGGGGTGATTGCGGCCAAGAATCCATCCAACATCGCTTTTGCATGCGATCGTGGTAGCTTTCCTTGTATTCAAGTCGATTACGAGATTGGTACCAGATTACTCCTTTACTTCCGATCCACCAGCTCTCCAATGGTGAAGCTGAGTTCCTCCAGAACCGTGGTGGGCAAGCCTGTCTCAGCCACTGTTGCCTATTTCTCGTCTCGAGGACCTAACTCGATAGCACCGGAGATTCTAAAGCCCGACATAGCAGCACCTGGTGCAAATATATTGGCTGCAACTTCCCCCTACGATTTGAGAAGTGTAGATGGGTACTCAATCCTCTCTGGAACTTCCATGGCTACTCCTCACGTCTCCGGCATGGTGGCGCTTCTCAAATCTGTCCACTCTGATTGGTCACCGGCCGCCATTAAATCCGCTCTTGTCACGACAGCGTGGAACCGCGGCCCGTCGGGGTTACCCATGTTTGCTGACGGCGCGACCAAGAAGATCGCCGACGCATTCGACTATGGAGGTGGAATCGCGAATCCGAACGGAGCGGCATACCCTGGTTTGGTCTACGACACGGACACCGCCGATTACCTACAGTACCTCTGTTCAATGGGCTACAACAACACCGGAATCTCTGGGCTAGTAGGGCAACCGACGGTTTGCCCGGTCGAGAAGCCATCTCTAATGGACCTAAACCTTCCTTCCGTTACAATACCGAGGCTCGTAAACTCCACCACCGTGAGGAGGACTGTCACAAATGTGGGAAGATCTGTGTCAATCTATAGAGCGGCGGTTGAGGCTCCGACCGGAACTACTGTTCAGGTGAAACCTACTGTTTTGATCTTCAGCGCCGCCGTGAAGAAACTGTCGTTTGAGGTGATGATCTCAACTACTCAGACATATAACGGCGGATATGGTTTCGGGAGCCTCACTTGGTCAGACGGAGTGCACGTAGTTAGAATTCCGTTGAGCGTCAAAACAGAGATTCCACCGACGGCTTATGCCTGA 2316 52.5 MDWRSGMCVLVIVFVGMIGDGVVAEAKTKVHIVYLGERQHNDPELVSHSHHLLLAKLLGSKEKAEESMVYSYRHGFSGFAAKLTESQAEKLSEMAGVHFVIPSSIYKLQTTRSWDFLHLSSDSHSDLLQTSNLGSDVIIGVLDTGISPESRSFNESGLGPIPLRWKGGCDSGDQFDPLTDCNRKIIGARWYVDGLTEEYGHPLNTSEIVEFFSPRDANGHGTHVASTAAGSFVSNVSYNGLAAGIARGGAPNARLAIYKVCWNIDGGQCGTADILKGIDEAIHDGVDVLSLSLGQSAPLFSEVDHRNTIAIGSFHAVARGITVVCAGGNEGPSALSVANTAPWIITVAACTVDRTFPTTITLRNNDILTGQALFSGAEIDFTGLYFPESNGVDPNANSVCESLSLNETLVAGKVVLCFTSTARNSAVASAQAAVKAAGGVGVIAAKNPSNIAFACDRGSFPCIQVDYEIGTRLLLYFRSTSSPMVKLSSSRTVVGKPVSATVAYFSSRGPNSIAPEILKPDIAAPGANILAATSPYDLRSVDGYSILSGTSMATPHVSGMVALLKSVHSDWSPAAIKSALVTTAWNRGPSGLPMFADGATKKIADAFDYGGGIANPNGAAYPGLVYDTDTADYLQYLCSMGYNNTGISGLVGQPTVCPVEKPSLMDLNLPSVTIPRLVNSTTVRRTVTNVGRSVSIYRAAVEAPTGTTVQVKPTVLIFSAAVKKLSFEVMISTTQTYNGGYGFGSLTWSDGVHVVRIPLSVKTEIPPTAYA 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29815588 29818700 + Bma021512.1 Bma05g00545 82629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00545 771 Gene3D - 353 494 - -
Bma05g00545 771 ProSitePatterns Serine proteases, subtilase family, histidine active site. 220 230 IPR022398 -
Bma05g00545 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Bma05g00545 771 Gene3D - 637 764 - -
Bma05g00545 771 CDD PA_subtilisin_like 359 487 - -
Bma05g00545 771 Pfam Fibronectin type-III domain 666 761 IPR041469 -
Bma05g00545 771 Gene3D Peptidase S8/S53 domain 136 633 IPR036852 GO:0004252|GO:0006508
Bma05g00545 771 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Bma05g00545 771 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Bma05g00545 771 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Bma05g00545 771 Pfam Subtilase family 134 589 IPR000209 GO:0006508|GO:0008236
Bma05g00545 771 ProSiteProfiles Serine proteases, subtilase domain profile. 113 620 - -
Bma05g00545 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 109 IPR037045 -
Bma05g00545 771 PANTHER PEPTIDASE S8 21 765 - -
Bma05g00545 771 SUPERFAMILY Subtilisin-like 26 695 IPR036852 GO:0004252|GO:0006508
Bma05g00545 771 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 21 765 - -
Bma05g00545 771 CDD Peptidases_S8_3 106 585 IPR034197 -
Bma05g00545 771 Pfam Peptidase inhibitor I9 30 108 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00545 Bma-Chr5:29815588 Bma07g00806 Bma-Chr7:24964994 2.20E-179 dispersed
Bma01g02481 Bma-Chr1:82543265 Bma05g00545 Bma-Chr5:29815588 4.93E-13 transposed
Bma02g00187 Bma-Chr2:1729242 Bma05g00545 Bma-Chr5:29815588 1.05E-09 transposed
Bma05g00427 Bma-Chr5:13663105 Bma05g00545 Bma-Chr5:29815588 3.60E-170 transposed
Bma07g00315 Bma-Chr7:3797293 Bma05g00545 Bma-Chr5:29815588 1.18E-101 transposed
Bma10g00101 Bma-Chr10:974295 Bma05g00545 Bma-Chr5:29815588 9.23E-153 transposed
Bma12g00418 Bma-Chr12:9393661 Bma05g00545 Bma-Chr5:29815588 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00545 - - qsu:112005666 979.163