Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00599 | ATGGCTGGTCAATCTGATCCTCATCTCTCTCTATTTTCACCCGAGGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTTGAAATTGTTCCTAACATGAGAATGGATTCCCTCAATTTGATCTGTGGTGATTATGGTCCATTCATCCCTCAACTAGTGGCTCAAGTACCGTTGTGGCTAGCAATTGCTTTGAAAAAAAGAGGGAAATGTGCTATCCAGTCTCCAGAATGGATGTCTATCGAAAAGTTGACTCAGATTTTAGAAGCAGAACGAGAGTCTCAAGGAGCATTCCAGATACTACCATTTCATTATGTGGAAATCTCAAAGCTTCTTTTCGATCATGCACATAACGACATACAAGACATATACATGGTGAGATCTCTTGTCGAAGATATTAAAGATGTTAGGTTTCACAAAGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAGATCTGTCTGCCATGGAAGTAAATATTGTTCGCCCATTTGTTATCAGATCACTACAAGCAATCTATAATCATGGTAGCCCAGAGTTGGTTCCAGACCAAGAGAGAGTGTCTGGCAGAGTACAGCAAGAGCACGATCCTCGTCAAAGAGTAAGTTCTTTTCTAATTTTAATATTCTCACAATCATGA | 654 | 39.76 | MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPNMRMDSLNLICGDYGPFIPQLVAQVPLWLAIALKKRGKCAIQSPEWMSIEKLTQILEAERESQGAFQILPFHYVEISKLLFDHAHNDIQDIYMVRSLVEDIKDVRFHKVETSLEAIDTRTSAVKIKDLSAMEVNIVRPFVIRSLQAIYNHGSPELVPDQERVSGRVQQEHDPRQRVSSFLILIFSQS | 217 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 36215734 | 36217780 | + | Bma021621.1 | Bma05g00599 | 82683 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00599 | 217 | CDD | GINS_A_psf2 | 66 | 182 | - | - | |
Bma05g00599 | 217 | Gene3D | - | 78 | 190 | - | - | |
Bma05g00599 | 217 | Gene3D | - | 12 | 77 | - | - | |
Bma05g00599 | 217 | Pfam | GINS complex protein | 54 | 162 | IPR021151 | - | |
Bma05g00599 | 217 | PIRSF | GINS_PSF2 | 2 | 209 | IPR007257 | GO:0005634|GO:0006260 | |
Bma05g00599 | 217 | PANTHER | DNA REPLICATION COMPLEX GINS PROTEIN PSF2 | 1 | 197 | IPR007257 | GO:0005634|GO:0006260 | |
Bma05g00599 | 217 | SUPERFAMILY | GINS helical bundle-like | 74 | 181 | IPR036224 | - | |
Bma05g00599 | 217 | SUPERFAMILY | PriA/YqbF domain | 12 | 71 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g00599 | Bma-Chr5:36215734 | Bma07g01102 | Bma-Chr7:44184832 | 2.95E-94 | dispersed | |
Bma05g00599 | Bma-Chr5:36215734 | Bma07g00894 | Bma-Chr7:31324054 | 6.59E-157 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00599 | K10733 | - | csv:101212053 | 346.28 |