Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00599 ATGGCTGGTCAATCTGATCCTCATCTCTCTCTATTTTCACCCGAGGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTTGAAATTGTTCCTAACATGAGAATGGATTCCCTCAATTTGATCTGTGGTGATTATGGTCCATTCATCCCTCAACTAGTGGCTCAAGTACCGTTGTGGCTAGCAATTGCTTTGAAAAAAAGAGGGAAATGTGCTATCCAGTCTCCAGAATGGATGTCTATCGAAAAGTTGACTCAGATTTTAGAAGCAGAACGAGAGTCTCAAGGAGCATTCCAGATACTACCATTTCATTATGTGGAAATCTCAAAGCTTCTTTTCGATCATGCACATAACGACATACAAGACATATACATGGTGAGATCTCTTGTCGAAGATATTAAAGATGTTAGGTTTCACAAAGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAGATCTGTCTGCCATGGAAGTAAATATTGTTCGCCCATTTGTTATCAGATCACTACAAGCAATCTATAATCATGGTAGCCCAGAGTTGGTTCCAGACCAAGAGAGAGTGTCTGGCAGAGTACAGCAAGAGCACGATCCTCGTCAAAGAGTAAGTTCTTTTCTAATTTTAATATTCTCACAATCATGA 654 39.76 MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPNMRMDSLNLICGDYGPFIPQLVAQVPLWLAIALKKRGKCAIQSPEWMSIEKLTQILEAERESQGAFQILPFHYVEISKLLFDHAHNDIQDIYMVRSLVEDIKDVRFHKVETSLEAIDTRTSAVKIKDLSAMEVNIVRPFVIRSLQAIYNHGSPELVPDQERVSGRVQQEHDPRQRVSSFLILIFSQS 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36215734 36217780 + Bma021621.1 Bma05g00599 82683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00599 217 CDD GINS_A_psf2 66 182 - -
Bma05g00599 217 Gene3D - 78 190 - -
Bma05g00599 217 Gene3D - 12 77 - -
Bma05g00599 217 Pfam GINS complex protein 54 162 IPR021151 -
Bma05g00599 217 PIRSF GINS_PSF2 2 209 IPR007257 GO:0005634|GO:0006260
Bma05g00599 217 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 197 IPR007257 GO:0005634|GO:0006260
Bma05g00599 217 SUPERFAMILY GINS helical bundle-like 74 181 IPR036224 -
Bma05g00599 217 SUPERFAMILY PriA/YqbF domain 12 71 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00599 Bma-Chr5:36215734 Bma07g01102 Bma-Chr7:44184832 2.95E-94 dispersed
Bma05g00599 Bma-Chr5:36215734 Bma07g00894 Bma-Chr7:31324054 6.59E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00599 K10733 - csv:101212053 346.28