Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00683 ATGGGAGGTAACCAGAAGAGTCACAGTGCGAATCCAAATGATTATAAGCTTCTTGAGGAGGTTGGACATGGCGCTAGTGCGACGGTTTACAGAGCGATCTATCTTCCGCTCAATGAAGTGGTGGCTGTCAAGTGCTTGGATCTCGATCGTTGCAATAGCAATCTGGATGACATTCGAAGGGAGGCCCAAACTATGAGTTTAATAGATCATCCAAATGTTGTAAGAGCATATTGCTCATTTGTTGTTGAACGGAACCTATGGGTCATTATGCCATTTATGGCAGAGGGTTCCTGTTTACACCTTATGAAGATAGCATATCCAGATGGCTTTGAAGAGGATGTTATTTGTTCTATACTAAAAGAAACTCTTAAAGCTTTGGACTACTTTCATTGCCAGGGACATATTCACAGAGATGTAAAGGCTGGAAATATACTACTCGATAGCAACGGAGTGGTAAAGCTTGCTGACTTTGGTGTTACTGCTTGCATGTTTGACTCTGGTGATAGACAACGATCTAGAAATACTTTCGTTGGGACTCCATGCTGGATGGCACCAGAGGTATTGCAACCAGGAAGTGGATATAATTTCAAGGCTGATATCTGGTCATTTGGTATAACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCGAAATATCCTCCAATGAAGGTACTTCTCATGACCATCCAAAATTCTCCTCCAGGTCTAGATTATGATCGTGACAAAAAATTCTCTAAGTCTTTCAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACGAAGAGACCTACAGCAGAAAAGCTGTTAAAACACAACTTTTTCAAGAGTGCAAAACCTCCGGAGCTTTCTGTGAAGAAATTATTTGATGACTTACCTCCTCTTTGGAATCGTGTGAAAGCTCTCCAGCTTAAAGATGCAGCGCAGCTAGCTCTAAAGAAAATGCCGTCATCCGAACAAGAAGCGTTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATATTGAGGATTTAAAAGCCCAAGCCTCACTGGTGCGTGATGATGAGGATGAGGATGATGATTTGGCAGATACGAGGGAACAGGAAGAAATCATCAAGTCAATTGTTAGTGATAAGGTGCTTGGATTTAACTCATTTAACTTATTAGTAAAATCAGTTGGCGTGGAGTTGGTGCAAGGTGAATCGTTCAGCAAAAAGGGTAAGACAACGGAAAACGAGTGGCTTGAATCTGGGACCACCCAAGAGAAAAGTGGTTTGAAGAAAAGCGGTACTAGCACTGAAACATCATCTTTTACATCCAGTCAAGACATTGTTCAATCAAAGAATAAAACCCAAATGCCAAAAAGTCGGCAAACGCAGAGCGGGCCGCTAATGCCTGGTGTTGTGCTCAATCATTCTTTATCAGAAAGAGCTCGTAATCCAGAGAGGGATGAGTATGAAATTCAACCAACTGCAGAAAAATTTCAGCGTGATCTGCGACAGACACCAAGTTTTAGTGGTCCTTTAATGCTGCCAAACCGTGCTTCAGCAAACAGCTTATCAGCACCTATAAAATCTTCTGGAGGATATAGAGATTCATTAGATGAAAAGTCAAAGGCTAATCTTGTGCAAATTAAAGGGCGGTTTTCTGTGACGTCAGAAAACTTAGATCTTGCCAAGGATATTCCATTAAGTACAGTACCACGTCGAACTTCCCAGGGATCCCCACTAAGAAAATCAGCTAGTGTCGGTGATTGGGTATTTGACTCAAAACAAATGCTCGTCGGTCAATCCCAAAGGGAGCTTTCCAACAGTAATATACCCGCTACACTTCTCATGACTCATCTGCAGACTCTTTTTCAGCAGAACTCAATTCAACAGGATCTTATATTCAATTTGTTTAATACCCTCCAGCCAACTGACGTAGCGGATGCTACTCAAAATGGAAAGTTGCCTCCATTGCCTCGGAGCTCGGAGAACAATGGAAGTGTAAGTATATTCCATTGTGTAATCTTGTTACAACATAATATTGGCCACCATCTTCTTTGTCATTTATGA 2052 41.81 MGGNQKSHSANPNDYKLLEEVGHGASATVYRAIYLPLNEVVAVKCLDLDRCNSNLDDIRREAQTMSLIDHPNVVRAYCSFVVERNLWVIMPFMAEGSCLHLMKIAYPDGFEEDVICSILKETLKALDYFHCQGHIHRDVKAGNILLDSNGVVKLADFGVTACMFDSGDRQRSRNTFVGTPCWMAPEVLQPGSGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNSPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHNFFKSAKPPELSVKKLFDDLPPLWNRVKALQLKDAAQLALKKMPSSEQEALSQSEYQRGVSAWNFDIEDLKAQASLVRDDEDEDDDLADTREQEEIIKSIVSDKVLGFNSFNLLVKSVGVELVQGESFSKKGKTTENEWLESGTTQEKSGLKKSGTSTETSSFTSSQDIVQSKNKTQMPKSRQTQSGPLMPGVVLNHSLSERARNPERDEYEIQPTAEKFQRDLRQTPSFSGPLMLPNRASANSLSAPIKSSGGYRDSLDEKSKANLVQIKGRFSVTSENLDLAKDIPLSTVPRRTSQGSPLRKSASVGDWVFDSKQMLVGQSQRELSNSNIPATLLMTHLQTLFQQNSIQQDLIFNLFNTLQPTDVADATQNGKLPPLPRSSENNGSVSIFHCVILLQHNIGHHLLCHL 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39699566 39711377 - Bma021740.1 Bma05g00683 82767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00683 683 CDD STKc_OSR1_SPAK 13 276 - -
Bma05g00683 683 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00683 683 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00683 683 SUPERFAMILY Protein kinase-like (PK-like) 12 332 IPR011009 -
Bma05g00683 683 MobiDBLite consensus disorder prediction 411 464 - -
Bma05g00683 683 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Bma05g00683 683 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bma05g00683 683 MobiDBLite consensus disorder prediction 404 466 - -
Bma05g00683 683 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00683 683 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 663 - -
Bma05g00683 683 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 663 - -
Bma05g00683 683 Gene3D Transferase(Phosphotransferase) domain 1 96 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00683 Bma-Chr5:39699566 Bma10g00841 Bma-Chr10:15014080 8.37E-172 dispersed
Bma12g00255 Bma-Chr12:3305310 Bma05g00683 Bma-Chr5:39699566 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66499 PF00069 Pkinase 3.90E-59 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00683 - - jre:108993778 1013.83