Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00687 ATGTTTAGATGCATAGTCTGTACGCCGCAGACAAAAGACGATGGCGGAGATGCCGGTGGAAGTACGACGCCGCCCAGTTCGAAAGAAGCTGTCAAAAGCCTTACCACCCAGATCAAGGATATGGCATTGAAATTCTCTGGAGCTTATCGACAATGCAGACCATCTCCGGGCCCGAGCAGCTACAGAAAAGGACATAGGCCTTACCCCGATTTTGACACCGCTTCGGAAGGGATTCCGTATCCATTTTTCGGCGGTGCGAGTTCGAGTTCGACCCCTGCATGGGATTTCACGAATTCTAGGCGCCAGCCAACTGCAAGAGGTGATGACGAGCTAGCGTCTGCTAATGATGTTGTTCTTGATGATGACAATGAGCCCAAGGAGTGGATGGCACAGGTGGAGCCAGGTGTCCACATTACATTTGTGTCTCTTCCGGATGGCGGTAATGATCTACGACGGATTCGCTTCAGCCGAGAAATGTTCGATAAGTGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACCGAATAATGGAGCTATACAATGTACAAAGATTCAATCGACAAGCTCTTCATACTCCGCCTAGGTCGGAAGACGAGAGGGATTCGTCTTACTCAATGATTGCGGCATCGGCTCGGGGGAGTCCGATGACTTCATCCATGCACAAGGAATGGATGCCTAGGACTAAAAGCGGCAGTCAAAATTACAATTCCGGGGCGAGTTCTTACGGCGCAGGCTATCACAAAGGAGAGGTTTCGTCTTTCGAAGCATCAAGGACGACAACCTCTTCCAGAGACGAAGCTTCGGTGTCCGTCAGCAATGCCAGCGACTTAGAGGCGGAGTGGGTGGAAGAAGATGAGCCTGGAGTTTACATTACGATCAGACAGCTAGCGGACGGTACGAGAGAGCTCCGTCGAGTCCGATTCAGTCGGGAAAAGTTCGGGGAGACGAATGCGAAGCAGTGGTGGGAAGATAATAGAGAGAGGATACAAGCTCAGTACCTG 1002 51.4 MFRCIVCTPQTKDDGGDAGGSTTPPSSKEAVKSLTTQIKDMALKFSGAYRQCRPSPGPSSYRKGHRPYPDFDTASEGIPYPFFGGASSSSTPAWDFTNSRRQPTARGDDELASANDVVLDDDNEPKEWMAQVEPGVHITFVSLPDGGNDLRRIRFSREMFDKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDERDSSYSMIAASARGSPMTSSMHKEWMPRTKSGSQNYNSGASSYGAGYHKGEVSSFEASRTTTSSRDEASVSVSNASDLEAEWVEEDEPGVYITIRQLADGTRELRRVRFSREKFGETNAKQWWEDNRERIQAQYL 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39923367 39926087 - Bma031199 Bma05g00687 82771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00687 334 ProSiteProfiles BRX domain profile. 126 181 IPR013591 -
Bma05g00687 334 MobiDBLite consensus disorder prediction 215 236 - -
Bma05g00687 334 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 334 IPR044532 -
Bma05g00687 334 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 334 - -
Bma05g00687 334 MobiDBLite consensus disorder prediction 49 69 - -
Bma05g00687 334 ProSiteProfiles BRX domain profile. 279 334 IPR013591 -
Bma05g00687 334 Pfam Transcription factor BRX N-terminal domain 21 54 IPR027988 -
Bma05g00687 334 MobiDBLite consensus disorder prediction 8 32 - -
Bma05g00687 334 Pfam Transcription factor regulating root and shoot growth via Pin3 126 180 IPR013591 -
Bma05g00687 334 Pfam Transcription factor regulating root and shoot growth via Pin3 278 333 IPR013591 -
Bma05g00687 334 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00687 Bma-Chr5:39923367 Bma07g00967 Bma-Chr7:37103081 3.59E-139 dispersed
Bma05g00687 Bma-Chr5:39923367 Bma05g00692 Bma-Chr5:40473448 0 proximal
Bma12g00251 Bma-Chr12:3228306 Bma05g00687 Bma-Chr5:39923367 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00687 - - zju:107430964 514.227