Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00692 ATGTTTAGATGCATAGTCTGTACGCCGCAGACAAAAGACGATGGCGGAGATGCCGGTGGAAGTACGACGCCGCCCAGTTCGAAAGAAGCTGTCAAAAGCCTTACCACCCAGATCAAGGATATGGCATTGAAATTCTCTGGAGCTTATCGACAATGCAGACCATCTCCGGGCCCGAGCAGATACAGAAAAGGACATAGGCCTTACCCCGATTTCGACACTGCTTCGGAAGGGATTCCGTATCCATTTTTCGGCGGTGCGAGTTCGAGTTCGACCCCTGCATGGGATTTCACGAATTCTAGGCGCCAGCCAACTGCAAGAGGTGATGACGAGCTAGCGTCTGGTAATGATGTTGTTCTTGATGATGACAATGAGCCCAAGGAGTGGATGGCACAGGTGGAGCCAGGCGTCCACATTACATTTGTGTCTCTTCCGGATGGCGGTAATGATCTACGACGGATTCGCTTCAGCCGAGAAATGTTCGATAAGTGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACCGAATAATGGAGCTATACAATGTACAAAGATTCAATCGACAAGCTCTTCATACTCCGCCTAGGTCGGAAAACGAGTTCATTCCATCCAAACTCCCTACAGCTAATCAATGCTATTTACATCAGCTTCAGAGGGATTCGTCTTACTCAATGATTGCGGCATCGGCTCGGGGGAGTCCGATGACTTCATCCATGCACAAGGAATGGATGCCTAGGACTAAAAGCGGCAGTCAAAATTACAATTCCGGGGCGAGTTCTTACGGCGCAGGCTATCACAAAGGAGAGGTTTCGTCTTTCGAAGCATCAAGGACGACAACCTCTTCCAGAGACGAAGCTTCGGTCTCCGTCAGCAATGCCAGCGACTTAGAGGCGGAGTGGGTGGAAGAAGATGAGCCTGGAGTTTACATTACGATCAGACAGCTAGCGGACGGTACGAGAGAGCTCCGTCGAGTCCGATTCAGTCGGGAAAAGTTCGGGGAGACGAATGCGAAGCAGTGGTGGGAAGATAATAGAGAGAGGATACAAGCTCAGTACCTGTAA 1059 50.52 MFRCIVCTPQTKDDGGDAGGSTTPPSSKEAVKSLTTQIKDMALKFSGAYRQCRPSPGPSRYRKGHRPYPDFDTASEGIPYPFFGGASSSSTPAWDFTNSRRQPTARGDDELASGNDVVLDDDNEPKEWMAQVEPGVHITFVSLPDGGNDLRRIRFSREMFDKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSENEFIPSKLPTANQCYLHQLQRDSSYSMIAASARGSPMTSSMHKEWMPRTKSGSQNYNSGASSYGAGYHKGEVSSFEASRTTTSSRDEASVSVSNASDLEAEWVEEDEPGVYITIRQLADGTRELRRVRFSREKFGETNAKQWWEDNRERIQAQYL 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40473448 40476178 - Bma021755.1 Bma05g00692 82776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00692 352 MobiDBLite consensus disorder prediction 91 116 - -
Bma05g00692 352 ProSiteProfiles BRX domain profile. 126 181 IPR013591 -
Bma05g00692 352 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 352 - -
Bma05g00692 352 MobiDBLite consensus disorder prediction 234 254 - -
Bma05g00692 352 Pfam Transcription factor BRX N-terminal domain 21 54 IPR027988 -
Bma05g00692 352 Pfam Transcription factor regulating root and shoot growth via Pin3 126 180 IPR013591 -
Bma05g00692 352 Pfam Transcription factor regulating root and shoot growth via Pin3 296 351 IPR013591 -
Bma05g00692 352 ProSiteProfiles BRX domain profile. 297 352 IPR013591 -
Bma05g00692 352 MobiDBLite consensus disorder prediction 8 32 - -
Bma05g00692 352 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 352 IPR044532 -
Bma05g00692 352 MobiDBLite consensus disorder prediction 15 32 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00692 Bma07g00967 CCT
Bma05g00692 Bma14g00108 CCT
Bma05g00692 Bma12g00251 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00692 Bma-Chr5:40473448 Bma12g00251 Bma-Chr12:3228306 0 dispersed
Bma05g00687 Bma-Chr5:39923367 Bma05g00692 Bma-Chr5:40473448 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00692 - - zju:107434375 501.13