Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00704 ATGAGTTTTCAAGATATCGAGGCGGGCCGGCCCTTCGCTTATTCGAAGCGGGAAGTCATCAATGGCAAGCAGGACCCGACGCAAGCCGTCGCCTCTGGTGTATTTCAGATCAACACTGCCGTTGCTACCTTTCAGAGGCTCGTCAATACTTTAGGTACTCCGAAGGACACCCCCGAGCTCCGAGAGAAGCTGCACAAGACAAGGCTTCATATTGGACAGTTGGTGAAAGACACTTCTGCCAGACTTAAACAAGCAAGTGAAATAGATCATCAAACTGAAGTTAAAGCCAGCAAGAAAATTGCAGATGCAAAACTCGCCAAAGACTTTCAAGCGGTGTTGAAAGAATTTCAAAAGGCTCAACGACTTGCGGCTGAGAGAGAAACTGCATATACTCCTTTTGTTCCCCAAGCCATTCTCCCTTCCAGGTATACCAAGAACGACTTGTTACACAGTCCAGAAGGTAGTATTTTTATTAACAATGGCTTACTTTTGAATGGTTTTGAATCATCCTGCTTACTCTTGGTGATCTTTGGGATTTTGCTTCTCATTGTGATCATACTTGTGGCTGCTTAA 573 45.03 MSFQDIEAGRPFAYSKREVINGKQDPTQAVASGVFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSARLKQASEIDHQTEVKASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAILPSRYTKNDLLHSPEGSIFINNGLLLNGFESSCLLLVIFGILLLIVIILVAA 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 41032743 41037056 + Bma021777.1 Bma05g00704 82788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00704 190 PANTHER SYNTAXIN 7 151 IPR045242 -
Bma05g00704 190 SUPERFAMILY t-snare proteins 24 140 IPR010989 GO:0016020|GO:0016192
Bma05g00704 190 Pfam Syntaxin-like protein 31 130 IPR006011 GO:0016020
Bma05g00704 190 Gene3D - 21 134 - -
Bma05g00704 190 SMART SynN_4 15 128 IPR006011 GO:0016020
Bma05g00704 190 CDD SynN 24 157 IPR006011 GO:0016020
Bma05g00704 190 PANTHER SYNTAXIN OF PLANTS PROTEIN 7 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00704 Bma12g00235 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00704 Bma-Chr5:41032743 Bma06g00441 Bma-Chr6:16972276 5.15E-42 dispersed
Bma12g00235 Bma-Chr12:3044573 Bma05g00704 Bma-Chr5:41032743 1.34E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00704 - K08488 bhj:120089793 263.077