Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00708 ATGGTTTCAAGATCATATTCTAACTTGTTGGAGCTTGCGTCTGGCGGTGGCTCTCCCACATTCTGTCGAGAGAGGAAAAGGCTTCCTCGGGTTGCTACAGTTACCGGAGTGTTGTCTGACCTTGATGATGAAACCAGCAACAGTAATGGGTCGGACGCTCCCTCCTCAGTCTCTCAAGAACGAATGATTATCGTTGGTAATCAGCTTCCCCTTCGAGAACACAAAAACGAAAATGGAGAATGGAAATTCAGCTGGGACAAAGATTCAATTCTTTTACAACTCAAAGATGGTCTTGGAGAAGATGTAGAAGTGGTTTACATTGGTTGTCTTAAAGAGGAAATCGACCCAAATAAGCAAGATGAAGTGGCACAAGTTTTGCTCGACCAGTTCAAATGCGTCCCGACATTTCTACCTTCAGAGCTTTTCACCAAATTCTATCATGGATTCTGTAAGCAACACTTGTGGCCGCTATTTCACTACATGCTTCCTTTGTCGCCTGATCTTGGTGGCCGATTTGATCGATCCCTTTGGCAGGCTTACGTTTCAGTGAATAAGATTTTTGCCGATAAAGTAATGGAAGTGATTAGTCCGGACAATGATTTTGTTTGGGTTCATGACTACCATTTGATGGTTCTGCCAACCTTTTTAAGGAAGAGGTTCAATAGAGTGAAGCTTGGATTTTTCCTCCATAGCCCGTTTCCTTCATCCGAGATATATAGAACACTTCCGGTAAGAGATGAACTTCTCCGGGCTCTGTTGAATTCTGACCTTGTTGGCTTTCATACTTTTGATTATGCCAGACACTTCCTCTCTTGTTGCAGTAGAATGCTTGGCTTGTCTTATCAATCTAAGAGAGGCTACATCGGGCTTGAATATTTCGGCCGAACTGTTAGCATTAAAATACTTCCCGTCGGTATTCACATCGGTCAGCTCCAAAATGCATTGAATCTTCCCGAGACTCAAGCGAAAATTTCCGAATTACGAGATCGATTCAAGGGTCAAACGGTTCTGCTCGGGGTTGATGACATGGACATATTCAAAGGAATCAGTTTAAAACTTTTGGCAATGGAACAGTTGCTTTTACAGCATCCAGACAAAAGGGGTGAGGTTGTTCTTGTTCAAATTGCAAACCCGGCAAGAGGGCGAGGGAGAGATGTGCAAGAGGTGATAGCCGAAACCAATGCCACTGTCAATAGAATAAACGCCACATTTCGAAGGCCAGGATATGAGCCTGTAGTTTTGATCAATACCACGTTTCAATTTTACGAGAGAATTGCTTATTACGCAATTGCAGAGTGTTGTCTCGTGACAGCAGTGAGGGACGGGATGAATCTTATACCATACGAGTATATTATATGTCGACAAGGAAACCAGAAGTTAGACGAGACTCTCGGGCTTGAACCTTCAACCCCAAAGAAGAGCATGCTTGTGGTATCGGAGTTTATAGGATGTTCCCCATCACTGAGTGGAGCTATTCGAGTTAATCCATGGAATATCGATTCAGTTGCAGAAGCCATGGATTCTGCTTTGGGACTATCAGAGGCAGAAAAACAGCTTCGACACGACAAGCACTATCGATATGTTAGTACTCACGATGTTGCCTATTGGGCTCAGAGCTTTTTGCAGGATCTCGGCAGAGCTTGTAGAGATCACGTGATGAGAAGGTGTTGGGGGATTGGATTTGGATTAGGATTTAGAGTGATGGCTCTTGATCCGAATTTTAGGAAGCTCTCTATTGAACACATTGTTTCGGTTTATAAAAGGTCTAGGAATAGAGCGATTCTGTTAGATTATGATGGCACGATGTTGCAGCCCGGTTCGATTAGCATGAGTCCGAATGGGGAGGCGATCGAAATCTTGAACAGCTTATGCAGAGATCCGAAGAATGTGGTGTTCCTTGTCAGTGGGAAGAATAGAAAGACTCTGACTGAATGGTTTTCATCTTGTGAGAAGCTTGGAATTGCCGCTGAGCATGGCTATTACCTGAGGCCAAATCATGCTGCAGAGTGGGAAACTTGTGTTGCAGTGCCAGATTTTGAGTGGAAAATGATTGCAGAGCCGGTTATGCAATTATATACAGAAACAACTGATGGCTCCTTCATCGAAACTAAGGAGAGTGCTCTGGTTTGGAATTACATGCACGCAGATATAGATTTCGGGTCGTGCCAGGCGAAGGAACTTTTAGATCATCTCGAAAGTGTTCTCGCCAACGAGCCTGTCACCGTCAAGAGTGGCCAACACATTGTTGAAGTTAAACCTCAGGGTGTGAATAAAGGTATTGCAGCAGAATGTCTCCTCCAAACGACACGAGCGAAAGAAATGGTACCGGATTTCGTTCTATGCATAGGCGATGACAAGTCGGACGAGGACATGTTCGAGGTAATAATGGGCGCAAGAGCATCTCTCTGTCCGGATGCAGAAGTATTCGATTGTACTGTTGGCCAAAAACCAAGCAAGGCCAAGTATTACTTGGAAGACCCAACCGAGATCTTGCGAATGTTACAGGGGCTTGCCAACGCCTCAGAGCAGGCCTGTCGGAATGGTTCCCCGACATCGCAGAAGGTGGAGATTGCAGAGAGTAAGTAG 2586 44.74 MVSRSYSNLLELASGGGSPTFCRERKRLPRVATVTGVLSDLDDETSNSNGSDAPSSVSQERMIIVGNQLPLREHKNENGEWKFSWDKDSILLQLKDGLGEDVEVVYIGCLKEEIDPNKQDEVAQVLLDQFKCVPTFLPSELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDNDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLVGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQNALNLPETQAKISELRDRFKGQTVLLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGEVVLVQIANPARGRGRDVQEVIAETNATVNRINATFRRPGYEPVVLINTTFQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNQKLDETLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDSVAEAMDSALGLSEAEKQLRHDKHYRYVSTHDVAYWAQSFLQDLGRACRDHVMRRCWGIGFGLGFRVMALDPNFRKLSIEHIVSVYKRSRNRAILLDYDGTMLQPGSISMSPNGEAIEILNSLCRDPKNVVFLVSGKNRKTLTEWFSSCEKLGIAAEHGYYLRPNHAAEWETCVAVPDFEWKMIAEPVMQLYTETTDGSFIETKESALVWNYMHADIDFGSCQAKELLDHLESVLANEPVTVKSGQHIVEVKPQGVNKGIAAECLLQTTRAKEMVPDFVLCIGDDKSDEDMFEVIMGARASLCPDAEVFDCTVGQKPSKAKYYLEDPTEILRMLQGLANASEQACRNGSPTSQKVEIAESK 861
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 41135268 41138423 + Bma021783.1 Bma05g00708 82792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00708 861 Gene3D Glycogen Phosphorylase B; 313 529 - -
Bma05g00708 861 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 796 IPR006379 -
Bma05g00708 861 CDD GT20_TPS 61 544 IPR001830 GO:0003824|GO:0005992
Bma05g00708 861 Pfam Trehalose-phosphatase 595 827 IPR003337 GO:0003824|GO:0005992
Bma05g00708 861 SUPERFAMILY HAD-like 592 838 IPR036412 -
Bma05g00708 861 Gene3D - 591 697 IPR023214 -
Bma05g00708 861 Gene3D - 721 851 IPR023214 -
Bma05g00708 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 844 IPR001830 GO:0003824|GO:0005992
Bma05g00708 861 Pfam Glycosyltransferase family 20 61 544 IPR001830 GO:0003824|GO:0005992
Bma05g00708 861 MobiDBLite consensus disorder prediction 39 58 - -
Bma05g00708 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 548 - -
Bma05g00708 861 CDD HAD_TPP 593 827 - -
Bma05g00708 861 MobiDBLite consensus disorder prediction 842 861 - -
Bma05g00708 861 TIGRFAM T6PP: trehalose-phosphatase 589 838 IPR003337 GO:0003824|GO:0005992
Bma05g00708 861 Gene3D Glycogen Phosphorylase B; 54 312 - -
Bma05g00708 861 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 844 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00708 Bma12g00232 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00708 Bma-Chr5:41135268 Bma12g00257 Bma-Chr12:3341074 0 dispersed
Bma07g01154 Bma-Chr7:45762061 Bma05g00708 Bma-Chr5:41135268 1.77E-140 dispersed
Bma14g00269 Bma-Chr14:3159374 Bma05g00708 Bma-Chr5:41135268 3.28E-132 dispersed
Bma14g00980 Bma-Chr14:11404314 Bma05g00708 Bma-Chr5:41135268 0 transposed
Bma12g00232 Bma-Chr12:3024284 Bma05g00708 Bma-Chr5:41135268 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00708 K16055 - csv:101207192 1494.18