Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00740 ATGGAGAATGGTTCAGTGGTACTGGCTGATAGTCCACCTTCAACTCCTCTCAGTAAGATTATTTTGGTCTCCGCCATTGCTGCTGGTGTTCAATTTGGATGGGCTCTCCAGCTCTCGCTCTTAACTCCATACGTTCAGCAATTAGGAGTTCCCCACATTTGGACGTCATTCATCTGGCTCTGCGGTCCAATTTCTGGTATATTAGTTCAGCCTATCGCTGGCTACTACAGTGATCGGTGCACTTCCCGAATAGGTCGTCGCCGCCCATTTATTATTGGCGGTGCAGCCTTCGTCGCCCTCTCTATTTTCCTTATTGGCTTTGCTGCCGACATTGGCCATGCTCTGGGCGACGAACTGTCGAAGACCATGAAGCCGCGCGCCGTCGCCATTTTTGTTGTTGGTTTCTGGATCCTCGACGTTGCTAACAATATGCTGCAAGGACCATGTAGGGCTTTTCTGGCTGATCTCTCAGGTAGTGACCACAGGAAAGTGAGGCTCTCTAATGGCTTCTTCGCTTTCTTCATGGCCGTCGGAAATTTTTTGGGTTACAGTGCTGGTTCATATGGGGGACTCCACAAGTTCCTCCCCTTCACCGAGACAAAAGCCTGCGACGTTAACTGTGCGAATCTAAAAACATGCTTCATCATCGAAATCCTCCTCCTGGGCATCGTGACAGTATTCGCCGTTTCAACGGTGAGCGAGATTCCGTTGGTTAAGAAAAAGGACAAGGAGGAATCAGAACCGTTCTTCAAGCAATTGTGGACGGCGTTCAAGCAGCTTTCTAGACCCATGTGGATTCTCTTCCTCGTGACTGCTTTCAACTGGATCGCTTGGTTCTCATTCCTGTTGTATGACACGGACTGGATGGGTTTGGACGTGTACGGAGGAAAGCCGACGGGGACGGCGCAAGAAGTGAGGATTTATGATATGGGTGTGCGAGCTGGGGCTCTAGGTTTGGTGATTAACTCCATTGTTTTGGGTTTTGCATCGCTCGCCGTGGAGCCCATTAGTGGGGCTTTGAAGGGTGCGAAGAACTGGTGGGGATTTGTTAACTTAATCCTAGCCATCTCCATGTGTATGACTGTGTTTGTGAGTAAGGCTGCCCAGCAGTGGAGGTCTGTGAATTACAGTGTTCCATGGGCTCTGGCATCCATCTACTCCGAGAGTTGCGGCGCTGGCCAAGGGCTTTCTGTGGGACTGCTGAACCTGGTGGTCGTCATCCCACAGATGATCGTATCGATGGTGAGCGGTCCACTGGATGCAGCGTTCGGGGGCGGAAACTCAGCGGCGTTCGTGATGGGCGGCATAGCAGCGGCAGTAAGCGCGGTGTTGGCACTCACGATTCTTCCGAAAACACAGAGGCAATCCAGCTCCTCCTTGATCATGGGAGGACAATAA 1398 51.43 MENGSVVLADSPPSTPLSKIILVSAIAAGVQFGWALQLSLLTPYVQQLGVPHIWTSFIWLCGPISGILVQPIAGYYSDRCTSRIGRRRPFIIGGAAFVALSIFLIGFAADIGHALGDELSKTMKPRAVAIFVVGFWILDVANNMLQGPCRAFLADLSGSDHRKVRLSNGFFAFFMAVGNFLGYSAGSYGGLHKFLPFTETKACDVNCANLKTCFIIEILLLGIVTVFAVSTVSEIPLVKKKDKEESEPFFKQLWTAFKQLSRPMWILFLVTAFNWIAWFSFLLYDTDWMGLDVYGGKPTGTAQEVRIYDMGVRAGALGLVINSIVLGFASLAVEPISGALKGAKNWWGFVNLILAISMCMTVFVSKAAQQWRSVNYSVPWALASIYSESCGAGQGLSVGLLNLVVVIPQMIVSMVSGPLDAAFGGGNSAAFVMGGIAAAVSAVLALTILPKTQRQSSSSLIMGGQ 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 43572069 43573785 - Bma021836.1 Bma05g00740 82824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00740 465 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 13 371 - -
Bma05g00740 465 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 373 456 - -
Bma05g00740 465 TIGRFAM GPH_sucrose: sucrose/H+ symporter 16 373 IPR005989 GO:0005887|GO:0008515|GO:0015770
Bma05g00740 465 Pfam MFS/sugar transport protein 32 277 - -
Bma05g00740 465 SUPERFAMILY MFS general substrate transporter 20 455 IPR036259 -
Bma05g00740 465 PANTHER SUGAR TRANSPORTER 13 371 - -
Bma05g00740 465 PANTHER SUGAR TRANSPORTER 373 456 - -
Bma05g00740 465 Gene3D MFS general substrate transporter like domains 17 452 IPR036259 -
Bma05g00740 465 CDD MFS_SLC45_SUC 20 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00089 Bma-Chr1:1005691 Bma05g00740 Bma-Chr5:43572069 2.05E-78 dispersed
Bma05g00740 Bma-Chr5:43572069 Bma14g00823 Bma-Chr14:9157942 0 dispersed
Bma05g00740 Bma-Chr5:43572069 Bma01g02572 Bma-Chr1:83321177 5.35E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00740 K15378 - csv:116401998 614.764