Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00760 ATGGGGGTTTTCACTTCTTTCTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCCCATGTTTTTTGTTATCACTGGCATTTGCACCAGTTCTGGTTTCAGGCTCTAATGATCTATTGGTTCCCACCATCAAGGTACCGACCGGCCGCCGTCTTCTAACAGTTGACGTCAACGGCTCCGGTGACTTCCGGTCCGTCCAAGAAGCGGTCGATGCAGTTCCAGATTACAATACAGCCAACGTCCTCATTAAAATTTGTCCCGGATATTACGTTGAGAAGGTGGTGGTGCCGGCGACGAAGCCGTACATCACGTTCGAAGGGGCGGGAAGAGGGTCGACGGTGATAGAGTGGCACGACAGGGCCGGCGACCGTGGTCCTAATGGGCAGCAGCTGCGTACATACAGAACAGCTTCTGTCACTGTCTTTGCCAATCACTTCTCTGCCAGAAACATCAGCTTCAAGAATACTGCTCCGGCACCAATGCCGGGAATGCAAGGGTGGCAGGCGGCGGCGTTTCGTATCTCCGGTGACAAAGCGTATTTTTCCGGCTGCGGGTTTTACGGGGCTCAAGACACTCTTTGTGACGACGCCGGCCGCCATTACTTCAAGGACTGCTACATTGAAGGTTCCATCGACTTCATCTTCGGGAATGGCCGATCTATGTACAAAAACTGTGAGCTACACTCAATAGCGACGAGGTTCGGGTCAATAGCGGCCCAAGATAGAAACTCGCCCGACGAGAAAACGGGTTTTGCTTTCGTGGGTTGCAAGGTGACGGGTACTGGGCCTATTTATGTGGGTCGGGCCATGGGGCAGTACTCTCGGATTGTGTACTCCTACACTTACTTTGACGACGTGGTGGCGGATGGCGGCTGGGATGACTGGGACCACGTCAGCAACAAAAATATGACTGCATTTTTTGGAGTGTACAAGTGCTGGGGGCCCGGAGCAGGAGCAGTGGGCGGGGCGGAGGTATCGTGGGCGCGGGAGCTGGATTTTGAGTCGGCGCACCCGTTTCTTAGGAAGAGCTTCGTCAATGGAAGACACTGGATTGCGCCGTCGGATGCTTAG 1065 53.52 MGVFTSFFLFFFFFFFFPCFLLSLAFAPVLVSGSNDLLVPTIKVPTGRRLLTVDVNGSGDFRSVQEAVDAVPDYNTANVLIKICPGYYVEKVVVPATKPYITFEGAGRGSTVIEWHDRAGDRGPNGQQLRTYRTASVTVFANHFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKNCELHSIATRFGSIAAQDRNSPDEKTGFAFVGCKVTGTGPIYVGRAMGQYSRIVYSYTYFDDVVADGGWDDWDHVSNKNMTAFFGVYKCWGPGAGAVGGAEVSWARELDFESAHPFLRKSFVNGRHWIAPSDA 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 44193082 44194768 + Bma021863.1 Bma05g00760 82844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00760 354 PANTHER PECTINESTERASE 68-RELATED 42 353 - -
Bma05g00760 354 ProSitePatterns Pectinesterase signature 2. 205 214 IPR033131 -
Bma05g00760 354 Gene3D - 47 353 IPR012334 -
Bma05g00760 354 Pfam Pectinesterase 52 345 IPR000070 GO:0030599|GO:0042545
Bma05g00760 354 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 42 353 - -
Bma05g00760 354 SUPERFAMILY Pectin lyase-like 49 351 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00760 Bma-Chr5:44193082 Bma11g00542 Bma-Chr11:7086756 8.88E-101 dispersed
Bma05g00760 Bma-Chr5:44193082 Bma14g00694 Bma-Chr14:7557918 1.48E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00760 - - cmo:103483059 551.592