Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00832 | ATGGCAGATTGGGGTTTGCAGGCAGTAGTGAGAGGATCCTGCAGCAGTGAGACTGATACACCGGTTTATAATATTATGGGTTCTGATGAACATTCTTGTTTTGCTGCTCCTTGTAGCTTCATGGGAGATGATTTTTCTCAGATTTTTCCCGATTATTTTGGAACTAATGCCAGTTTTGGGGAATTGGAAGGTCTGTTTAAGCCTTTTTGTCCTCCCGTTTTTCACCCTTTTTCCCCTCCGATTATGGCTACTTCCTCCATTTCTCTTCCCAGAGATAAAATCAAGGATGACCCAGAAAAAATTCAGCAGAAGAACCAGAATACTTCTGCAACTAAATGTAAAACCAGCAAGAAGAACCAGCAAACTAGGGTAGTGAAAGAGGTTTCAGCGGACGGAATATCTTCCGATGTGTGGGCATGGAGAAAATATGGTCAAAAACCGATAAAGGGTTCGCCCTATCCGAGAAGCTACTACAGATGCAGCAGCTCAAAGGGATGCTCCGCCAGAAAACAAGTGGAACGAAGCTATTCCGATCCATCCATCTTCACCATAACCTACACATCAGACCACAACCACGCCCACCCCACTCGCCGGAACTCTCTCGCCGGAAGCACCCGGAACAAGTTTCCGAAATCGAAAAACGCGGAAATCAACAGTAACACTTTCAACAAAGAAAACATGTTATCTCCTGCTTCTGCTTCAATGACTTCTAACGAAGAGGAGGTTGAGCACATCATTAGACTAAAGAAGGAAGAAGAACAGGTCATGGAAGAAGGCGACAGTGCTGAAGTTTTCTTGCCTGGTTTCTTCTCCAACGATGATTTGTTTCCAAGCGTAGAAGATTTGCTCTTTGGGTAG | 858 | 44.52 | MADWGLQAVVRGSCSSETDTPVYNIMGSDEHSCFAAPCSFMGDDFSQIFPDYFGTNASFGELEGLFKPFCPPVFHPFSPPIMATSSISLPRDKIKDDPEKIQQKNQNTSATKCKTSKKNQQTRVVKEVSADGISSDVWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSYSDPSIFTITYTSDHNHAHPTRRNSLAGSTRNKFPKSKNAEINSNTFNKENMLSPASASMTSNEEEVEHIIRLKKEEEQVMEEGDSAEVFLPGFFSNDDLFPSVEDLLFG | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 45698139 | 45699197 | + | Bma021942.1 | Bma05g00832 | 82916 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00832 | 285 | PANTHER | WRKY TRANSCRIPTION FACTOR 63-RELATED | 3 | 282 | - | - | |
Bma05g00832 | 285 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 3 | 282 | IPR044810 | GO:0003700 | |
Bma05g00832 | 285 | Pfam | WRKY DNA -binding domain | 136 | 192 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma05g00832 | 285 | SMART | WRKY_cls | 134 | 194 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma05g00832 | 285 | SUPERFAMILY | WRKY DNA-binding domain | 132 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma05g00832 | 285 | MobiDBLite | consensus disorder prediction | 190 | 216 | - | - | |
Bma05g00832 | 285 | MobiDBLite | consensus disorder prediction | 197 | 216 | - | - | |
Bma05g00832 | 285 | Gene3D | WRKY domain | 118 | 196 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma05g00832 | 285 | ProSiteProfiles | WRKY domain profile. | 129 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g00832 | Bma-Chr5:45698139 | Bma14g00891 | Bma-Chr14:10081084 | 5.12E-36 | dispersed | |
Bma05g00832 | Bma-Chr5:45698139 | Bma06g01183 | Bma-Chr6:48898016 | 9.64E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57340 | PF03106 | WRKY | 1.60E-25 | CL0274 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00832 | K13426 | K13425 | pvy:116107521 | 245.743 |