Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00835 ATGGAGGGGAAGGAAGAGGATGTCAAGCTCGGAGCGAACAAGTATTCTGAGAGGCAACCGATTGGTACGTCTGCTCAGACGGACAAGGACTACAAGGAACCACCGCCGGCGCCGTTGTTTGAGCCCGGAGAGCTCACTTCATGGTCTTTTTACAGAGCCGGAATCGCAGAGTTTATCGCTACTTTCTTGTTCCTCTACATCTCCCTTTTGACTGTCATGGGTGTTGCCCAAACTCCAAACAAATGTAATTCTGTGGGTGTTCAAGGAATCGCCTGGGCTTTTGGTGGAATGATCTTCGCCCTCGTGTACTGCACAGCTGGAATTTCAGGAGGACACATCAACCCAGCTGTAACCTTCGGTCTCTTTCTAGCAAGAAAACTTTCTCTCACAAGAGCCATCTTCTACATAATTATGCAGTGCTTGGGCGCTATTTGCGGAGCTGGGGTGGTGAAGGGATTTGAAGGCTCAACGACGTACGAACTGGAGCGAGGTGGGGCGAACATCGTTCAATCCGGCTACACCAAAGGAGATGGGCTCGGAGCTGAAATCGTCGGCACCTTTGTGCTTGTCTACACCGTCTTCTCCGCCACCGATGCCAAGAGAAACGCCCGAGACTCTCATGTTCCGATTTTGGCTCCGCTTCCGATCGGGTTTGCAGTGTTTTTGGTTCATTTGGCTACCATTCCCATCACCGGAACTGGTATCAACCCGGCGAGGAGTCTTGGAGCAGCAATCATCTACAACAGAGAGCACGCGTGGGATGACCAATGGATCTTTTGGGTGGGACCATTCATCGGAGCTGCTCTTGCTGCGCTGTACCACGTGATAGTGATCAGAGCCATTCCTTTCAAGACCAGAGCTTGA 864 51.62 MEGKEEDVKLGANKYSERQPIGTSAQTDKDYKEPPPAPLFEPGELTSWSFYRAGIAEFIATFLFLYISLLTVMGVAQTPNKCNSVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEGSTTYELERGGANIVQSGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNREHAWDDQWIFWVGPFIGAALAALYHVIVIRAIPFKTRA 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45726737 45728176 + Bma021945.1 Bma05g00835 82919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00835 287 MobiDBLite consensus disorder prediction 1 35 - -
Bma05g00835 287 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 SUPERFAMILY Aquaporin-like 44 279 IPR023271 -
Bma05g00835 287 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Bma05g00835 287 PANTHER AQUAPORIN PIP1-3 1 286 - -
Bma05g00835 287 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Bma05g00835 287 Pfam Major intrinsic protein 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 CDD MIP 52 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma05g00835 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 286 IPR034294 -
Bma05g00835 287 TIGRFAM MIP: MIP family channel proteins 56 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00835 Bma12g00064 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00835 Bma-Chr5:45726737 Bma08g01152 Bma-Chr8:50551770 1.14E-129 dispersed
Bma03g00261 Bma-Chr3:1993417 Bma05g00835 Bma-Chr5:45726737 8.77E-177 transposed
Bma12g01165 Bma-Chr12:44195489 Bma05g00835 Bma-Chr5:45726737 1.43E-24 wgd
Bma12g00064 Bma-Chr12:1219290 Bma05g00835 Bma-Chr5:45726737 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00835 K09872 - dcr:108208983 540.036