Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00839 ATGGCTAGCTCGTGGAGAGCGCGCGGGTCTCTGATCGTGTTGGCAATCGTTTGCCTTGGCTGTTTATTTGCAATTTCAATTGCAAAAGAGGAAGCAACTAAGTTGGGGACAGTCATTGGAATAGACCTCGGCACTACATACTCGTGTGTTGGTGTATACAAAAATGGTCACGTTGAAATTATAGCAAATGACCAAGGAAATCGTATCACTCCCTCATGGGTTGCTTTCACAGAAAGTGAGAGACTTATTGGTGAGGCCGCAAAAAATCAAGCGGCTGTCAACCCAGAAAGAACCATTTTTGACGTCAAGAGACTTATCGGAAGAAAGTTTGAGGACAAGGAAGTACAGAAAGACATGAAGCTTGTTCCGTATAAGATTGTGAACAAAGATGGCAAACCATATATTCAGGTGCAAATCAATAATGGTGAAACTAAGGTTTTTAGCCCTGAAGAGATCAGTGCCATGATTCTGATTAAGATGAAGGAAACTGCGGAAGCATTCCTTGGCAAGAAAATCAAGGATGCTGTTGTGACGGTTCCTGCTTACTTCAATGACGCCCAGAGGCAGGCTACTAAGGATGCAGGCGTGATTGCTGGGCTTAATGTTGCTAGAATCATAAATGAACCTACTGCAGCTGCCATCGCTTATGGTCTGGACAAGAAAGGTGGTGAGAAAAACATTCTTGTGTTTGATCTGGGAGGTGGGACATTCGATGTCAGTATTTTGACTATCGACAATGGTGTTTTTGAGGTTCTGGCCACAAATGGAGACACTCATTTAGGAGGTGAAGATTTTGATCAGAGAATAATGGAATACTTCATTAAATTGATCAAGAAGAAGCATGGAAAGGATATCAGCAAGGACAACAGAGCACTTGGGAAATTGAGAAGAGAGGCTGAGCGTGCCAAGAGAGCTTTGAGTAGCCAACACCAGGTCCGAGTTGAGATTGAATCACTTTTTGATGGTGTCGATTTCTCTGAGCCATTGACACGAGCTCGATTTGAAGAGCTGAACAATGACTTGTTCAGAAAAACAATGGGACCAGTGAAAAAGGCAATGGAAGATGCTGGATTGGAAAAGAACCAGATAGATGAGATTGTCCTTGTCGGTGGAAGCACACGAATTCCCAAAGTTCAACAGCTTCTCAAGGACTATTTTGATGGGAAGGAACCCAACAAGGGAGTGAATCCTGATGAGGCTGTTGCATATGGTGCTGCAGTACAAGGAAGCATCTTGAGTGGAGAGGGCGGTGAAGAAACTAAAGATATCCTTCTTCTTGATGTCGCTCCTCTCACCCTCGGAATCGAGACTGTTGGTGGGGTGATGACCAAGTTGATTCCAAGAAACACTGTTATCCCCACCAAGAAATCTCAGGTCTTCACTACATACCAGGATCAACAGACTACTGTCTCTATTCAGGTCTTCGAAGGTGAAAGGAGTCTGACCAAGGACTGCAGAAATCTGGGGAAATTCGATTTGAATGGAATTCCTCCAGCTCCAAGGGGAACCCCTCAAATAGAAGTCACATTCGAAGTCGATGCGAATGGTATTCTTAACGTGAAAGCCGAAGACAAAGGAACAGGAAAGTCGGAGAAGATCACAATCACCAACGACAAAGGCAGACTGAGCCAGGAGGAGATTGAGCGAATGGTCCGGGAAGCCGAAGAGTTTGCAGAGGAAGACAAGAAGGTTAAGGATAGAATTGACGCGAGAAACAGCCTCGAGACCTATGTCTACAACATGAAGAACCAGATCAATGACAAAGACAAGCTTGCAGACAAGCTCGAATCTGATGAGAAAGACAAGATTGAGGCTGCAGTGAAGGAGGCACTCGAGTGGCTAGACGACAATCAAAGTGCCGAGAAGGAGGACTATGAAGAGAAGCTCAAAGAGGTCGAAGCCGTGTGCAACCCCATCATCACTGCCATTTATCAGAGGTCTGGTGGCCCCACATCGGGCGGATCGGCCGAGGATGAAGATGAATCTCATGATGAGCTTTGA 2001 45.28 MASSWRARGSLIVLAIVCLGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTESERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDMKLVPYKIVNKDGKPYIQVQINNGETKVFSPEEISAMILIKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKDRIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIEAAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAIYQRSGGPTSGGSAEDEDESHDEL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 45774111 45777947 + Bma021950.1 Bma05g00839 82923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00839 666 Gene3D - 571 646 IPR029048 -
Bma05g00839 666 Coils Coil 603 635 - -
Bma05g00839 666 PANTHER HEAT SHOCK PROTEIN 70KDA 23 653 IPR013126 GO:0005524|GO:0140662
Bma05g00839 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 229 242 IPR018181 -
Bma05g00839 666 Gene3D - 221 395 - -
Bma05g00839 666 Coils Coil 581 601 - -
Bma05g00839 666 Pfam Hsp70 protein 38 645 IPR013126 GO:0005524|GO:0140662
Bma05g00839 666 Gene3D Actin; Chain A, domain 4 261 344 - -
Bma05g00839 666 MobiDBLite consensus disorder prediction 643 666 - -
Bma05g00839 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 575 IPR029047 -
Bma05g00839 666 SUPERFAMILY Actin-like ATPase domain 36 220 IPR043129 -
Bma05g00839 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 651 IPR029048 -
Bma05g00839 666 Coils Coil 285 305 - -
Bma05g00839 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 417 570 IPR029047 -
Bma05g00839 666 Gene3D - 39 410 - -
Bma05g00839 666 Coils Coil 547 567 - -
Bma05g00839 666 CDD HSPA5-like_NBD 36 410 IPR042050 -
Bma05g00839 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 366 380 IPR018181 -
Bma05g00839 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 41 48 IPR018181 -
Bma05g00839 666 SUPERFAMILY Actin-like ATPase domain 223 414 IPR043129 -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 37 50 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 87 95 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 175 195 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 363 379 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 395 415 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 235 245 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 422 441 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 65 77 - -
Bma05g00839 666 PRINTS 70kDa heat shock protein signature 503 519 - -
Bma05g00839 666 PANTHER LUMINAL-BINDING PROTEIN 23 653 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00580 Bma-Chr5:33712572 Bma05g00839 Bma-Chr5:45774111 0 dispersed
Bma05g00839 Bma-Chr5:45774111 Bma12g00262 Bma-Chr12:3458273 0 dispersed
Bma12g00396 Bma-Chr12:8327182 Bma05g00839 Bma-Chr5:45774111 0 dispersed
Bma05g00839 Bma-Chr5:45774111 Bma10g00293 Bma-Chr10:2671676 0 transposed
Bma05g00839 Bma-Chr5:45774111 Bma08g00994 Bma-Chr8:49032753 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00839 K09490 - jre:109002071 1254.97