Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00848 ATGAACGACGCTGATGTATCCAAGCAGATCCAGCAGATGGTGAGGTTTATCCGGCAGGAAGCGGAGGAAAAGGCGAATGAAATCTCCGTCTCTGCGGAAGAAGAATTCAACATCGAGAAGTTGCAACTGGTCGAGGCTGAAAAAAAGAAGATCAGACAAGAGTACGAGAAAAAAGAGAAGCAAGTCGAAGTTAGAAAGAAAATTGAGTATTCCATGCAGCTCAATACTTCTAGAATTAAAGTCCTGCAAGCTCAAGATGACGTTGTTAACTCCATGAAAGAAGCAGCGTCTAAAGAACTTTTGAATGTCAGCCGAGATCAGCACGTATACAAAAATCTACTCAAAGATCTCATAGTTCAGAGCTTGCTTCGATTGAAAGAACCGGCTTTATTGTTGCGATGTCGCAAAGACGACCTTCATTTGGTTGAGGATGTGCTACAACCTGCAGCAGATGCATATGCTAAAAAAGCAAATGTTCATCCTCCAGAAATTATAATTGACACTCGTGTGTTTCTACCACCTGCTCCAAGCCATCACAATGCTCATGGTCCATATTGCTCTGGAGGTGTGGTGTTGGCATCTCGAGATGGAAAGATCGTTTGTGAAAACACCCTTGATGCAAGGTTGGAAGTTGTTTTCCGCAAAAAACTTCCAGAGGTAATTTTTTATTGCCAGCTGCATAAC 684 42.54 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEVRKKIEYSMQLNTSRIKVLQAQDDVVNSMKEAASKELLNVSRDQHVYKNLLKDLIVQSLLRLKEPALLLRCRKDDLHLVEDVLQPAADAYAKKANVHPPEIIIDTRVFLPPAPSHHNAHGPYCSGGVVLASRDGKIVCENTLDARLEVVFRKKLPEVIFYCQLHN 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46031662 46033680 - Bma031211 Bma05g00848 82932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00848 228 Pfam ATP synthase (E/31 kDa) subunit 16 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bma05g00848 228 Gene3D - 1 62 - -
Bma05g00848 228 Coils Coil 38 61 - -
Bma05g00848 228 PANTHER BNAC03G72900D PROTEIN 1 220 - -
Bma05g00848 228 Hamap V-type proton ATPase subunit E [atpE]. 8 223 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bma05g00848 228 SUPERFAMILY V-type ATPase subunit E-like 87 221 - -
Bma05g00848 228 Gene3D - 92 223 IPR038495 -
Bma05g00848 228 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00848 Bma12g00600 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00600 Bma-Chr12:27319223 Bma05g00848 Bma-Chr5:46031662 8.59E-145 wgd
Bma12g00052 Bma-Chr12:1081180 Bma05g00848 Bma-Chr5:46031662 1.55E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00848 K02150 - rcu:8287721 373.244