Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00849 ATGGAAAATACTGGGTTAACCACTGATCAGAAAACAGGCGTTGAACATACCAAAGATCAAAACGGAGTTGATCAGGTGGTTCTTAAGAACTCCAGAGGGGCCTCTGCTCGGATTAGTTTGCATGGAGGCCAGGTTCTTTCATGGAAGACTGACCGAGGTGAAGAGCTGCTCTTCACAAGCAGCAAGTCCATATTCAAACCACCAAATGCTGTACGAGGAGGCATTCAAATTTGTTTCCCGCAGTTTGGAACTCGTGGAAACCTCGAACAGCACGGGTTTGCCAGGAACAAATCATGGGTGTTTGAAGAAGATCCTCCACCTCTCCATCTCAATGAGTCTATCGGTAAAGCTTTCGCTGACTTACTACTCAAACCCTCTGAAGACGATATGAAGATATGGCCCCACGGTTTTGAATTCAGGCTTAGGGTCAGCTTGGCAGCAGATGGAAGTCTTGCTTTGACATCAAGAATAAGGAATATAAATTGCAAGCCTTTCAGTTTTTCAATTGCTTATCATACATATTTCTCCATTTCTGATATCAGGTATCGAAAAAAAGAGAATTACATGTTCATTTTGTGGTATGTGATCTTAATAATTTCTGTACTGATTAGTGAAGTGAGAGTGGAGGGATTGGAGACTCTCGACTACCTCGACAATCTACACAAGAAAGAGCGGTTCACGGAACAAGGAGATGCATTGACATTCGAATCCGAGGTTGATCGAGTATATCTGAGTTCTTCTGATCTGATAGCCATTTTCGATCACGAAAGAAAAAGGACATTCGTCATAAGAAAAGAAGGACTTCCGGACGTTGTGGTGTGGAATCCATGGGAGAAGAAGGCTCGATCGATAATTGATTTCGGAGATGAAGAGTACAAGCACATGCTTTGTGTCGACGGGGCGGCGATTGAAAAACCGATAACGTTGAAGCCGGGGGAGGAGTGGACGGGACGATTAGAAATTGCAGTGGTTGCTTCCAGTTAA 984 43.9 MENTGLTTDQKTGVEHTKDQNGVDQVVLKNSRGASARISLHGGQVLSWKTDRGEELLFTSSKSIFKPPNAVRGGIQICFPQFGTRGNLEQHGFARNKSWVFEEDPPPLHLNESIGKAFADLLLKPSEDDMKIWPHGFEFRLRVSLAADGSLALTSRIRNINCKPFSFSIAYHTYFSISDIRYRKKENYMFILWYVILIISVLISEVRVEGLETLDYLDNLHKKERFTEQGDALTFESEVDRVYLSSSDLIAIFDHERKRTFVIRKEGLPDVVVWNPWEKKARSIIDFGDEEYKHMLCVDGAAIEKPITLKPGEEWTGRLEIAVVASS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46035904 46037659 + Bma021964.3 Bma05g00849 82933

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00849 327 PIRSF PHexose_mutarotase 197 327 IPR025532 -
Bma05g00849 327 PIRSF PHexose_mutarotase 3 186 IPR025532 -
Bma05g00849 327 CDD D-hex-6-P-epi_like 26 322 IPR025532 -
Bma05g00849 327 Pfam Aldose 1-epimerase 24 321 IPR008183 GO:0005975|GO:0016853
Bma05g00849 327 Gene3D - 3 325 IPR014718 GO:0030246
Bma05g00849 327 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 199 327 - -
Bma05g00849 327 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 6 182 - -
Bma05g00849 327 MobiDBLite consensus disorder prediction 1 21 - -
Bma05g00849 327 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 199 327 - -
Bma05g00849 327 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 6 182 - -
Bma05g00849 327 SUPERFAMILY Galactose mutarotase-like 15 321 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00849 K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] - rcu:8287725 503.056
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00849 Bma-Chr5:46035904 Bma11g00695 Bma-Chr11:16330176 5.25E-140 dispersed
Bma05g00849 Bma-Chr5:46035904 Bma06g00118 Bma-Chr6:1615449 4.99E-28 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g97 Blo02g01136 . . Bda08g00488 Bpe05g00676 . . . . Cmo16g00612 . . . . . Cpe14g00477 . . . . . . . . Cla07g01406 Cam07g1507 Cec07g1604 Cco07g1561 Clacu07g1497 Cmu07g1467 Cre07g1843 . . . . . . . Cme07g01587 . . . . . . Bma05g00849 . . . . Cma06g01035 Cma16g00563 . . . . . . . . . . . . . . . . . . . Csa04g00635 Chy07g01178 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000273 4 7 4 5 2 4 5 4 4 4 4 4 6 4 5 6 4 8 6 4 4 4 4 4 4 4 4 15 8 4 149