Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00872 ATGACCACAGAAGATGTCGAGAATGATAAATGCGATATGGAAATCGATGGATTTGTGCAGGATCAAGGGAAAGTACTCTCCAATGGATTCAACGTCGACTATCTCAAAGTTTACTACGCAAAACTTTTTCCACATGCTGATATTTTCAAATGGATGTCATATGGAAATGATGGGAAGCATCCGGCTTGCGATCAATCCTATTGTGGTAGAAGAGAATTTTCGTTTACACTGGAAAATGATATTTATGTGCGGTTTCAGTCTTTTCAGAGTTTGTCTGCGATGGAAAGTTCTATAAAAGAGAAGTGCCCTTTCAAAATAGATATTGGGCCTGTATACAGTGTGGATCCGGCAAAAAGACATGCGTATGCACAAAGTGGTGATAATGTTTTTACTCCCGTAGAGAGAGAGTTGGTTTTTGATATAGACATGACAGATTATGATGATGTTAGATACTGTTGTTCAGGAGCTGATGTTTGCTTGGACTGCTGGCCGCTAATGACTGCTGCTATCAAAGTTATCGATACTGTCCTCAGAGATGATTTTGGATTCAATCACATTTTATGGGTATATAGTGGTAGACGTGGGGTTCATTGTTGGGTTTGTGATGGGAAAGCAAGAAGGTTATCTAATGAACAGAGGGCAGCTATTGCTGACTATTTTCACTTGTACCAGGGCAATGAAAACAGTCATAAGAAGGTTTCTTTGGGTGGTCCATGTCTTCATCCGTTTCTTGCGAGATCATATGAGGAAGTTCTCAAGGACATTTTTGAGAAACAATTGCTCTTGAGTCAAAAAATCTTCTCAACAGATGAGAGATATGAGAAGATCTTGGAAATGATTTCTGATGAGTCCGTTGCCTCAGAGATTCGAGGGAGGTGGCAAGAGAATAAGCGATCATCCTCTTCCAAAGATGACATAAATGTCATACGATGGGAGCAGCTAAAGAAGGTGCTGCAATTGGGGAAACAACGGACGCAAGGAATTCGAAGGTGTGTAGAGGAAATAGTTTTCTCTTTTACCTACCCGAGGCTGGACATGGAGGTTACAAAACACATGAACCATCTGTTGAAGGCACCATTTTGTGTTCATCCAAAAACAGGTCGTGTATGTGTTCCTATTGATCCAGAAAATTGCGATGACTTTGATCCTACTACTGTTCCAACTCTTTCTCAGCTCCTAGAAGAACTCAATGCCAGTGATAGGAGCTCTGATGTTGATAATGAATTAGATGGAACCTCCCTTGGGAGATCCTTGAGGTTCTTCAGATCTTCATTCTTGCAACCTCTTCTAAAATCGTGCAAGGAGGAAATGGAAAGTCAGTATAACTCCAAATTGCAGAAGTCGAACTCCTTGAGCTGGTAG 1362 40.97 MTTEDVENDKCDMEIDGFVQDQGKVLSNGFNVDYLKVYYAKLFPHADIFKWMSYGNDGKHPACDQSYCGRREFSFTLENDIYVRFQSFQSLSAMESSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTVLRDDFGFNHILWVYSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSHKKVSLGGPCLHPFLARSYEEVLKDIFEKQLLLSQKIFSTDERYEKILEMISDESVASEIRGRWQENKRSSSSKDDINVIRWEQLKKVLQLGKQRTQGIRRCVEEIVFSFTYPRLDMEVTKHMNHLLKAPFCVHPKTGRVCVPIDPENCDDFDPTTVPTLSQLLEELNASDRSSDVDNELDGTSLGRSLRFFRSSFLQPLLKSCKEEMESQYNSKLQKSNSLSW 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46372217 46376792 + Bma021992.1 Bma05g00872 82956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00872 453 Gene3D DNA primase, PRIM domain 22 435 - -
Bma05g00872 453 CDD AE_Prim_S 44 383 IPR014052 GO:0003896|GO:0006269
Bma05g00872 453 PANTHER DNA PRIMASE SMALL SUBUNIT 41 453 IPR014052 GO:0003896|GO:0006269
Bma05g00872 453 SUPERFAMILY Prim-pol domain 31 398 - -
Bma05g00872 453 Pfam DNA primase small subunit 139 374 IPR002755 GO:0003896|GO:0006269
Bma05g00872 453 PANTHER DNA PRIMASE 41 453 - -
Bma05g00872 453 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 36 394 IPR014052 GO:0003896|GO:0006269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00872 K02684 - jre:108987131 744.191