Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00895 ATGTGCGTCTGTCTGGAGAAATGGCGAGTCTTGTGGCTTCTTTGCATTTATCTGATATCTTTCCTCATATGCAAGAGCAGTGGTATCAGTCCTGATGGTGAGGCACTTTTAAGTTTTAGGACAGCAGTAGTTAATTCTGATGGTACTCTCCTTCACTGGAGACAAGAGGATACTGACCCATGCGATTGGAAAGGAGTGAAGTGCGATCCAAAAACAAAGAGAGTCATATTCTTGAACCTTGCAAATCACAAACTAAGTGGATCGATATCATCTGACCTTGGGAAACTAGATCAAATGAAAATTTTAGTTCTTCATGACAATAACTTCTATGGGTCAATTCCAGCCGAATTGGGAAATTGCTCGCAGTTGAAAGGACTATTCTTGCAGCGTAATTACTTAAGTGGATCAATACCAAGTGAATTAGGAAATCTTTCAGAACTGGAGAATCTAGACATTTCAAGCAATTCTCTGAGCGGAAATATCCCCGCATCACTTGGGAAATTGGATAATCTAACGTCCTTCAATGTTTCGACCAACTTTTTGATCGGACCAATTCCTTCTGATGGCATCTTCCTCAACTTTACCGAGAGCTCCTTTGTTGGAAACCGAGGTTTGTGCGGGAGACAGATTAGTGTGACTTGCAAAAATGAAAGTGGAGGGTCGGGATCGAACTCCCACCCCCAATCTTCAAACTCCGATCAAAATCCAGGTGGAAAAAGGAAATACTCTGGTCGCCTTCTTATAAGTGCATCGGCTACTGTTGGTGCACTTCTTCTGGTAGCACTTATGTGCTTTTGGGGGTGCTTTTTGTATAAGAAGTTTGGTAAAAACGACAATAAAGGTCTTGCCGTCGATGTTTCTGGAGGAGCATCAATTGTAATGTTTCATGGAGACTTACCATATTCTTCAAAAGACATAATTAAGAAACTGGAAACATTGAACGAAGAACACATAATAGGCTGCGGTGGTTTCGGAACCGTCTACAAGCTAGCAATGGATGATGGCAATGTATTTGCTCTGAAAAGAATTGTAAAGATGAACGAAGGGTTTGATCGGTTTTTTGAGAGGGAGCTCGAGATTCTTGGAAGCATAAAACATCGTTACCTTGTGAATTTGAGGGGTTATTGCAATTCTCCTACGTCAAAACTGCTCATTTATGATTTTCTCTCGGGTGGTAGTCTCGACGAAGCGCTTCATGAAAGATCTGAACTACTCGACTGGGATGCACGATTGAACATTATCTTGGGAGCAGCGAAAGGGTTAGCCTACTTGCATCATGATTGCTCGCCCAGGATCATTCATCGGGACATAAAATCGAGCAACATTTTACTTGATGGCAATCTGGAGGCTCGAGTTTCTGACTTTGGACTAGCCAAACTTTTGGAGGATGAAGAATCTCACATTACGACCATTGTGGCAGGAACATTTGGTTATCTGGCTCCCGAGTATATGCAGAGTGGTAGGGCTACCGAAAAGACGGATGTTTATAGTTTTGGGGTGCTCGTGCTTGAAGTGTTGAGCGGAAAGCGACCCACTGATGCTTCGTTCATCGAGAAAGGCCTCAACATTGTTGGCTGTTTAAATTTTCTGGTCTCCGAAGATAGGCAAAGAGAAATTGTCGATCCACAATGCGAGGGAGTGCAGACTGAAACTCTAGATGCCTTGCTCTCGGTAGCCATCCAGTGTGTTTCTTCAAGTCCGGAGGAGAGGCCGACCATGCACAGGGTCGTCCAATTGCTCGAGTCTGAGGTTATGACCCCATGCCTAAGCGACTTCTACGACACAAACTCAGACTAA 1797 43.57 MCVCLEKWRVLWLLCIYLISFLICKSSGISPDGEALLSFRTAVVNSDGTLLHWRQEDTDPCDWKGVKCDPKTKRVIFLNLANHKLSGSISSDLGKLDQMKILVLHDNNFYGSIPAELGNCSQLKGLFLQRNYLSGSIPSELGNLSELENLDISSNSLSGNIPASLGKLDNLTSFNVSTNFLIGPIPSDGIFLNFTESSFVGNRGLCGRQISVTCKNESGGSGSNSHPQSSNSDQNPGGKRKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDNKGLAVDVSGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIVKMNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDFLSGGSLDEALHERSELLDWDARLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGCLNFLVSEDRQREIVDPQCEGVQTETLDALLSVAIQCVSSSPEERPTMHRVVQLLESEVMTPCLSDFYDTNSD 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46755243 46758664 + Bma022013.1 Bma05g00895 82979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00895 598 Pfam Protein kinase domain 315 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00895 598 Gene3D Transferase(Phosphotransferase) domain 1 389 588 - -
Bma05g00895 598 PANTHER RECEPTOR-LIKE PROTEIN 55 3 598 - -
Bma05g00895 598 SUPERFAMILY Protein kinase-like (PK-like) 296 580 IPR011009 -
Bma05g00895 598 SUPERFAMILY L domain-like 30 195 - -
Bma05g00895 598 ProSitePatterns Protein kinases ATP-binding region signature. 319 345 IPR017441 GO:0005524
Bma05g00895 598 ProSiteProfiles Protein kinase domain profile. 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00895 598 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Bma05g00895 598 MobiDBLite consensus disorder prediction 217 238 - -
Bma05g00895 598 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Bma05g00895 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Bma05g00895 598 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 598 IPR031071 GO:0004672|GO:0005524|GO:0030244
Bma05g00895 598 SMART serkin_6 313 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00895 598 Gene3D Phosphorylase Kinase; domain 1 289 388 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00895 Bma12g00624 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00895 Bma-Chr5:46755243 Bma06g01441 Bma-Chr6:51107230 3.95E-104 dispersed
Bma08g00212 Bma-Chr8:2621428 Bma05g00895 Bma-Chr5:46755243 7.76E-54 dispersed
Bma07g01126 Bma-Chr7:45034231 Bma05g00895 Bma-Chr5:46755243 4.26E-86 transposed
Bma13g00647 Bma-Chr13:15848796 Bma05g00895 Bma-Chr5:46755243 5.55E-96 transposed
Bma14g01515 Bma-Chr14:30635792 Bma05g00895 Bma-Chr5:46755243 1.31E-87 transposed
Bma14g01531 Bma-Chr14:30950777 Bma05g00895 Bma-Chr5:46755243 7.64E-87 transposed
Bma12g00624 Bma-Chr12:27486608 Bma05g00895 Bma-Chr5:46755243 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66503 PF00069 Pkinase 8.40E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00895 - - jre:109014233 1005.36