Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00898 ATGCTGAGTGCAAGATACTGCAGATGGCTACATCTTTTATGGTCTATGCTAATTTTGCTAAAGGGTGAAGGGTTCAATGTGGATATAACTTACGTTGAGAGTGCACTTGCCAAAGGAGCTGTTTGTTTGGATGGAAGTGCTCCGGCTTACCATTCAAGTCCCGGATTCGGATCTGGAGTCGACAATTGGTTGGTCGAAATCGAGGGTGGAGGATGGTGTAATAATGTGACTACTTGCCTTGTTCGTAAGACCACTCGACTAGGTTCATCGAAGGCAATGGTCACACAACTCGCCTTCTCCGGAATTCTCAGTAACAATCAAAAATCCAATCCGGACTTTTACAGTTGGAACAAAATCAAGGTTAGATACTGTGATGGATCTTCTTTTACCGGTGATGTCGAAGCTGTCGATCCAGCTACCAATCTTCATTTCAGAGGAGCAAGGGTGTGGCTTGCTGTTGTTGAGGATCTATTAGCCAAAGGGATGAAAAATGCTAAAAATGCGATTCTCTCTGGTTGTTCTGCTGGTGGTTTGACATCTATTTTGCACTGTGATAACTTCAGATCTCTGCTCCCCCCATCTGCCACGGTTAAATGCTTAGCAGATGCGGGATATTTCATCAATGCGAAGGATGTTTCCGGAGCTTCACACATCGAATCTTTCTACAATGATGTGGTGGAAACTCATAATTCGGCAAAGAATTTGCCTGCAGCCTGCACTTCAAAACTAAGACCGGGGTTGTGCTTCTTTCCGCAAAATGCCGCCCCGCATATCCAAACCCCGCTGTTTCTTGTAAATGCAGCATACGATTCATGGCAGATTAAGAACATTTTAGCACCTGGCGTTGCCGATCCGCACGGCCTGTGGCACAACTGCAAGCTCGATATAAAAAGCTGCTCCTCCAGTCAGCTTGCAACCATACAAGCTTACAGATTGGAGTTCTTAGACGCATTAAATGGGGTGATAACCTCCCCGTCGAACGGAATGTTTGTAGACGCTTGCTACGCCCACTGCCAGACCGAAATGCAGGAAACATGGTTGAGGGACGATTCCCCTGCACTTAAAAACACGTGTCTATTTACGAGTCTTGAGATGCTAATTTTTAAAAAGATTGCAGAGGCAGTTGGAGACTGGTTTTTCGACAGAACGACTTTCCGAACGATAGATTGCGCTTACCCTTGCAACCCGACTTGCCATAACCGGATATTTGAATCTCAAACGGAACTCTGA 1230 45.61 MLSARYCRWLHLLWSMLILLKGEGFNVDITYVESALAKGAVCLDGSAPAYHSSPGFGSGVDNWLVEIEGGGWCNNVTTCLVRKTTRLGSSKAMVTQLAFSGILSNNQKSNPDFYSWNKIKVRYCDGSSFTGDVEAVDPATNLHFRGARVWLAVVEDLLAKGMKNAKNAILSGCSAGGLTSILHCDNFRSLLPPSATVKCLADAGYFINAKDVSGASHIESFYNDVVETHNSAKNLPAACTSKLRPGLCFFPQNAAPHIQTPLFLVNAAYDSWQIKNILAPGVADPHGLWHNCKLDIKSCSSSQLATIQAYRLEFLDALNGVITSPSNGMFVDACYAHCQTEMQETWLRDDSPALKNTCLFTSLEMLIFKKIAEAVGDWFFDRTTFRTIDCAYPCNPTCHNRIFESQTEL 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46826758 46829306 + Bma022017.1 Bma05g00898 82982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00898 409 Pfam Pectinacetylesterase 23 384 IPR004963 GO:0016787
Bma05g00898 409 PANTHER NOTUM-RELATED 6 403 IPR004963 GO:0016787
Bma05g00898 409 PANTHER PECTIN ACETYLESTERASE 6 403 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00898 Bma12g00626 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01870 Bma-Chr1:68613085 Bma05g00898 Bma-Chr5:46826758 2.17E-133 dispersed
Bma05g00898 Bma-Chr5:46826758 Bma12g00632 Bma-Chr12:27585398 0 dispersed
Bma01g00647 Bma-Chr1:5828563 Bma05g00898 Bma-Chr5:46826758 1.15E-145 transposed
Bma12g00626 Bma-Chr12:27503088 Bma05g00898 Bma-Chr5:46826758 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00898 K19882 - zju:107430580 632.098