Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00901 ATGGTGTTCGGTCGAGCTGCGGATGCATTTTCTTTTGCATCCAATCGCTGGTTAGGGAGTCAGTCTTCCACCTCCGGTTATGAATCAACGTCACAATCTGAATCCTCCCATACTGCGATGGAAGTCGGACCTCATGCTATTGCCATTCCCGCCTCTCCCCACAAGAACAATATTAGGCTCTCATCCTCTCTTCAAGATTTCTCTGCCTATCATAGACTAGATCCTGAAGAGGGCAATCCCAACGTTGAGAATACGACCCCTCACTTTCAACCGCGTCATTCTTTGCAGCTGGAGAATTCCGGCTCTAGCTTTTCCAAAGACAAGGCACTGCCAGGACGCAGAGTCTCTCAGTTACTACGCACGAAGAAGTGGATGCGAGCCCTTTTGATTTGCCTGTGCATAATTGCCAGTGCTTTTCTAATATATACATTTTCCAGGTCTGTTTATTCTCATTGGTCTGAAGGAAGATCCAAATTCTATGTTGTCCTTGATTGTGGCAGTACTGGTACTCGAGTTTTTATATATCAGGCTTTCATTAATGACGATAGAAATAACGCACTTCCTGTAATTGTCAAGCCATTTACTGGACATCGTCAAAAGAAATTCAATTTGCAGAATGGACGGGCATATGATAGAATGGAGAATGAACCTGGATTAGATAAGTTGGTGCATAATGCATCTGGCTTAAAAGCAGCTTTAAGGCCTCTTCTTGGCTGGGCCGAGAAGCAAATTCCCAAGAGTGCACATCAGAGTACCTCTCTTTACCTTTTCGCCACAGCTGGTGTTCGTAGGTTACCTGCTGCAGATTCAAAATGGCTTCTAGACAAAGCATGGTCAATAATGAAGAATTCGCCATTTTTATGCCATCAGGAATGGGTTCATACTATATCTGGCACAGAGGAAGCTTATTATGGTTGGATAGCCCTTAATCATCGTGCCGGAGTCTTGGGGGATACACTGAGAAGACCAACGTATGGGGCACTTGACTTGGGTGGTTCTTCATTGCAGATTACATTTGAAAGCAAGGAACAAGATAATTCGACTCTGAATGTTAGAATTGGACCTGTTAGCCATTATCTCGGTGCATACTCTCTTTCGGGCTATGGTTTAAATGATGCATTTGGAAAATCAGTGGTTTATCTATTAAAAAAGATCCCAAAAATCTCTAAAGCTGATCTGATTAATGGTAGGTTGGAACTTAAACACCCTTGCCTACAGTTTGGGTTTAAAGAACGATATGTATGTTCGCGGTGTAGGAGCTCTCCCATAGCAAATAAGAGCTGGGGAAAATCAGGAAGCTCAGACATCTCTATCCAGCTTATTGGTGCTCCCAACTGGGATGAATGTGCTGCTCTTGCAAAAGTTGTTGTGAATAGTTCGAATTGGTCAAATACAACTTCTGCACTTGATTGTGAGGTGCAACCTTGTGCTATTCCCGATGGCTTTTATCGCCCATATGGCCAGTTTTATGCTATATCAGGTTTTTTTGTGGTGTATCGATTTTTTAACCTGACATCAGATGCTGCTCTTGATGATGTCTTGGATAAAGGCAGAGAATTCTGTGAGAAATCTTGGGAAGTTGCTAAGCATAGTGTTGTTCTTCAGCCTTTCATTGAGCAGTACTGCTTTAGGGCGCCTTATATTGTGTCTCTTTTAAGAGAGGGCTTGCACATTACGGATAAACAACTTGTCATCGGTTCTGGAAGTATAACTTGGACTCTTGGGGTTGCCCTATTGGAAGCTGGCAAGGAATATTCAACTAAACCAGGGTTTCATGGTTATACCGTTCTTCAAATGAAAATAAACCCAATGGCTTTTGTTGCCATCTTGTTGATTTCATCGGTTCTCCTTCTTTTTGCATTATCACGAGTACACAAGTGGATCAGGATGCCTCGATTTTTTAGGAGGCCATATTCTCATCTTTTTAGACAGAACAGTGTATCTTCAAGTTCTGTTCTTGGCGTTCCATCTCCTTTTCAGTTACAGCGCTGGAGTCCTATTAGTTCTGGGGATGGAAGAGTGAAGATGCCACTGAGCCCAACGATCGGTGGGGCTCAAGAAAGACCCTTTGGGTTTGGACATGGGTGGTTCAGCAGTGGCAGTTCTGGTGCACCCACCATGGCAACCAGTGGAAACGTTGGGCACAGCTACTCCTTAAATAACCTTGGTCTAATGCAATTCGAGAGCAACATGATGGGTTCCTTCTGGTCACCCCACAGAGGCCAGACCAGGCTTCAAAGCAGACGATCTCAGTCTAGAGAAGACCTTAGTTCCTCACTGGCTGAGACACACTTGGTAAAGGTCTAA 2307 43.87 MVFGRAADAFSFASNRWLGSQSSTSGYESTSQSESSHTAMEVGPHAIAIPASPHKNNIRLSSSLQDFSAYHRLDPEEGNPNVENTTPHFQPRHSLQLENSGSSFSKDKALPGRRVSQLLRTKKWMRALLICLCIIASAFLIYTFSRSVYSHWSEGRSKFYVVLDCGSTGTRVFIYQAFINDDRNNALPVIVKPFTGHRQKKFNLQNGRAYDRMENEPGLDKLVHNASGLKAALRPLLGWAEKQIPKSAHQSTSLYLFATAGVRRLPAADSKWLLDKAWSIMKNSPFLCHQEWVHTISGTEEAYYGWIALNHRAGVLGDTLRRPTYGALDLGGSSLQITFESKEQDNSTLNVRIGPVSHYLGAYSLSGYGLNDAFGKSVVYLLKKIPKISKADLINGRLELKHPCLQFGFKERYVCSRCRSSPIANKSWGKSGSSDISIQLIGAPNWDECAALAKVVVNSSNWSNTTSALDCEVQPCAIPDGFYRPYGQFYAISGFFVVYRFFNLTSDAALDDVLDKGREFCEKSWEVAKHSVVLQPFIEQYCFRAPYIVSLLREGLHITDKQLVIGSGSITWTLGVALLEAGKEYSTKPGFHGYTVLQMKINPMAFVAILLISSVLLLFALSRVHKWIRMPRFFRRPYSHLFRQNSVSSSSVLGVPSPFQLQRWSPISSGDGRVKMPLSPTIGGAQERPFGFGHGWFSSGSSGAPTMATSGNVGHSYSLNNLGLMQFESNMMGSFWSPHRGQTRLQSRRSQSREDLSSSLAETHLVKV 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46892785 46895812 - Bma022021.1 Bma05g00901 82985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00901 768 MobiDBLite consensus disorder prediction 19 39 - -
Bma05g00901 768 MobiDBLite consensus disorder prediction 19 40 - -
Bma05g00901 768 Gene3D - 148 298 - -
Bma05g00901 768 MobiDBLite consensus disorder prediction 74 94 - -
Bma05g00901 768 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 94 725 IPR000407 GO:0016787
Bma05g00901 768 MobiDBLite consensus disorder prediction 738 768 - -
Bma05g00901 768 Gene3D Exopolyphosphatase. Domain 2 299 566 - -
Bma05g00901 768 Pfam GDA1/CD39 (nucleoside phosphatase) family 156 579 IPR000407 GO:0016787
Bma05g00901 768 PANTHER APYRASE 7-RELATED 94 725 - -
Bma05g00901 768 MobiDBLite consensus disorder prediction 79 94 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00901 Bma-Chr5:46892785 Bma06g00710 Bma-Chr6:37524215 6.81E-40 dispersed
Bma05g00901 Bma-Chr5:46892785 Bma05g01350 Bma-Chr5:53045068 8.23E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00901 - - pavi:110763903 902.508