Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00907 ATGAGCAAGATATACAGTTGGAGGAAATGGGAAAATCAAGTTGCCTTAGCTGCTGAAGAGAATTTGCAAGCTAAGAAAAACAAAGTGATGAGGAGACAGTCCACCTTTGTTTTCCATCACACGTCTCATCCTTGGAGCAGAAGCCGAATTCTCATTTGGATGCTCTGCTTCTTTCAACAATTTAAGAGCTCTATTAAGAAGTCAGATTACTTGGCCCTGCGATTAGGATTCATTACAAAACACAAGTTACCTCTTTCTTACAATTTTCACAAGTACATTGTTCGGAGCATGGAAGATGAGTTTCATGGAGTTTTGGGAATCAGCTATCCACTCTGGGGCTACGCCATACTTTTTATCTTCATTAATATCCATGGCCTGAACATCTACTTCTGGCTTTCTTTCATCCCTGCTATTGTTGTTATGGTGGTCGGGACAAAGCTTCAACACTGTGGTCTCGTCTTTAGCTCTTGA 471 40.98 MSKIYSWRKWENQVALAAEENLQAKKNKVMRRQSTFVFHHTSHPWSRSRILIWMLCFFQQFKSSIKKSDYLALRLGFITKHKLPLSYNFHKYIVRSMEDEFHGVLGISYPLWGYAILFIFINIHGLNIYFWLSFIPAIVVMVVGTKLQHCGLVFSS 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46948878 46950833 + Bma022028.1 Bma05g00907 82991

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00907 156 Pfam Mlo family 2 149 IPR004326 GO:0006952|GO:0016021
Bma05g00907 156 PANTHER MLO-LIKE PROTEIN 4 1 150 - -
Bma05g00907 156 PANTHER MLO-LIKE PROTEIN 1 1 150 IPR004326 GO:0006952|GO:0016021
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00907 K08472 MLO; mlo protein - pop:18098272 288.885
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00907 Bma-Chr5:46948878 Bma03g00957 Bma-Chr3:10172429 2.02E-58 dispersed
Bma05g00907 Bma-Chr5:46948878 Bma03g00332 Bma-Chr3:2477381 2.01E-34 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma14g00277 . 3 547 MLO family AT5G53760 66.1 2.7e-202 701.8
Bma07g01182 . 9 509 MLO family AT5G53760 56.6 6.4e-164 574.3
Bma05g00907 . 3 149 MLO family AT5G53760 52.0 5.6e-43 172.6
Bma14g00277 . 3 547 MLO family AT1G26700 63.7 1.6e-191 666.0
Bma07g01182 . 5 487 MLO family AT1G26700 59.0 4.9e-161 564.7
Bma05g00907 . 3 149 MLO family AT1G26700 50.7 6.0e-42 169.1
Bma03g00332 CCT,ECH 5 502 MLO family AT2G39200 69.8 1.8e-198 689.1
Bma08g00944 CCT,ECH 4 526 MLO family AT2G39200 65.5 3.6e-191 664.8
Bma07g01505 BCT,CCT,ECH 8 513 MLO family AT2G39200 64.6 4.4e-189 657.9
Bma11g00163 CCT,ECH 9 572 MLO family AT2G39200 58.7 1.7e-180 629.4
Bma07g00138 . 8 544 MLO family AT2G39200 58.8 1.4e-171 599.7
Bma01g00695 . 13 462 MLO family AT2G39200 51.3 2.2e-124 443.0
Bma15g00899 . 27 296 MLO family AT2G39200 51.0 9.9e-72 268.1
Bma03g00332 CCT,ECH 1 417 MLO family AT1G61560 66.8 2.2e-158 555.4
Bma07g01505 BCT,CCT,ECH 8 413 MLO family AT1G61560 66.7 1.8e-155 545.8
Bma11g00163 CCT,ECH 9 449 MLO family AT1G61560 62.1 1.6e-151 532.7
Bma08g00944 CCT,ECH 3 434 MLO family AT1G61560 60.9 1.5e-146 516.2
Bma07g00138 . 8 453 MLO family AT1G61560 58.6 9.1e-144 506.9
Bma15g00911 CCT 28 415 MLO family AT1G61560 52.9 3.3e-117 418.7
Bma01g00695 . 13 404 MLO family AT1G61560 52.0 9.8e-114 407.1
Bma15g00899 . 28 296 MLO family AT1G61560 52.9 2.7e-79 292.7
Bma15g00911 CCT 10 465 MLO family AT2G17430 68.4 2.0e-175 612.5
Bma01g00695 . 10 468 MLO family AT2G17430 61.3 1.1e-157 553.5
Bma09g00238 . 10 524 MLO family AT2G17430 56.7 2.5e-157 552.4
Bma07g01505 BCT,CCT,ECH 3 455 MLO family AT2G17430 51.0 6.8e-123 438.0
Bma15g00899 . 10 298 MLO family AT2G17430 65.4 3.9e-102 369.0
Bma15g00911 CCT 4 565 MLO family AT2G17480 62.3 3.2e-190 661.8
Bma09g00238 . 4 573 MLO family AT2G17480 58.6 8.4e-175 610.5
Bma01g00695 . 13 467 MLO family AT2G17480 64.0 4.3e-163 571.6
Bma15g00899 . 4 298 MLO family AT2G17480 67.2 7.2e-110 394.8
Bma01g00695 . 13 369 MLO family AT1G42560 65.9 8.7e-133 470.3
Bma15g00911 CCT 28 380 MLO family AT1G42560 59.1 6.3e-115 411.0
Bma09g00238 . 28 439 MLO family AT1G42560 50.8 9.1e-106 380.6
Bma07g01505 BCT,CCT,ECH 6 378 MLO family AT1G42560 50.1 3.6e-94 342.0
Bma15g00899 . 28 297 MLO family AT1G42560 60.2 3.8e-88 322.0
Bma08g00426 . 5 424 MLO family AT4G24250 50.9 9.6e-106 380.6
Bma15g00911 CCT 5 380 MLO family AT5G65970 69.4 4.6e-147 518.1
Bma09g00238 . 5 439 MLO family AT5G65970 56.3 2.8e-128 455.7
Bma01g00695 . 7 369 MLO family AT5G65970 62.6 8.1e-128 454.1
Bma15g00899 . 5 298 MLO family AT5G65970 66.7 3.2e-108 389.0
Bma07g01505 BCT,CCT,ECH 2 378 MLO family AT5G65970 52.3 1.1e-103 374.0
Bma01g00695 . 13 494 MLO family AT2G33670 65.8 4.4e-177 617.8
Bma15g00911 CCT 28 463 MLO family AT2G33670 63.4 5.8e-153 537.7
Bma09g00238 . 28 522 MLO family AT2G33670 55.2 3.2e-143 505.4
Bma15g00899 . 28 297 MLO family AT2G33670 62.0 6.3e-91 331.6
Bma03g00332 CCT,ECH 63 506 MLO family AT1G11310 64.1 2.1e-166 582.4
Bma08g00944 CCT,ECH 62 593 MLO family AT1G11310 57.2 3.5e-161 565.1
Bma07g01505 BCT,CCT,ECH 63 505 MLO family AT1G11310 63.6 2.1e-158 555.8
Bma11g00163 CCT,ECH 64 562 MLO family AT1G11310 58.5 4.7e-158 554.7
Bma07g00138 . 64 531 MLO family AT1G11310 58.4 4.9e-147 518.1
Bma01g00695 . 68 457 MLO family AT1G11310 51.1 6.0e-105 378.3
Bma08g00426 . 1 424 MLO family AT2G44110 59.6 1.2e-137 486.9
Bma08g00426 . 1 424 MLO family AT4G02600 59.5 1.3e-139 493.4
Bma03g00957 CCT 6 461 MLO family AT1G11000 51.5 6.1e-130 461.5
Bma05g00907 . 1 149 MLO family AT1G11000 71.8 1.3e-63 241.1
Bma08g00426 . 1 424 MLO family AT4G02600 59.5 1.3e-139 493.4
Bma03g00332 CCT,ECH 63 506 MLO family AT1G11310 64.1 2.1e-166 582.4
Bma08g00944 CCT,ECH 62 593 MLO family AT1G11310 57.2 3.5e-161 565.1
Bma07g01505 BCT,CCT,ECH 63 505 MLO family AT1G11310 63.6 2.1e-158 555.8
Bma11g00163 CCT,ECH 64 562 MLO family AT1G11310 58.5 4.7e-158 554.7
Bma07g00138 . 64 531 MLO family AT1G11310 58.4 4.9e-147 518.1
Bma01g00695 . 68 457 MLO family AT1G11310 51.1 6.0e-105 378.3
Bma03g00957 CCT 6 461 MLO family AT1G11000 51.5 6.1e-130 461.5
Bma05g00907 . 1 149 MLO family AT1G11000 71.8 1.3e-63 241.1
Bma01g00695 . 13 494 MLO family AT2G33670 65.8 4.4e-177 617.8
Bma15g00911 CCT 28 463 MLO family AT2G33670 63.4 5.8e-153 537.7
Bma09g00238 . 28 522 MLO family AT2G33670 55.2 3.2e-143 505.4
Bma15g00899 . 28 297 MLO family AT2G33670 62.0 6.3e-91 331.6
Bma03g00332 CCT,ECH 1 417 MLO family AT1G61560 66.8 2.2e-158 555.4
Bma07g01505 BCT,CCT,ECH 8 413 MLO family AT1G61560 66.7 1.8e-155 545.8
Bma11g00163 CCT,ECH 9 449 MLO family AT1G61560 62.1 1.6e-151 532.7
Bma08g00944 CCT,ECH 3 434 MLO family AT1G61560 60.9 1.5e-146 516.2
Bma07g00138 . 8 453 MLO family AT1G61560 58.6 9.1e-144 506.9
Bma15g00911 CCT 28 415 MLO family AT1G61560 52.9 3.3e-117 418.7
Bma01g00695 . 13 404 MLO family AT1G61560 52.0 9.8e-114 407.1
Bma15g00899 . 28 296 MLO family AT1G61560 52.9 2.7e-79 292.7
Bma15g00911 CCT 10 465 MLO family AT2G17430 68.4 2.0e-175 612.5
Bma01g00695 . 10 468 MLO family AT2G17430 61.3 1.1e-157 553.5
Bma09g00238 . 10 524 MLO family AT2G17430 56.7 2.5e-157 552.4
Bma07g01505 BCT,CCT,ECH 3 455 MLO family AT2G17430 51.0 6.8e-123 438.0
Bma15g00899 . 10 298 MLO family AT2G17430 65.4 3.9e-102 369.0
Bma15g00911 CCT 4 565 MLO family AT2G17480 62.3 3.2e-190 661.8
Bma09g00238 . 4 573 MLO family AT2G17480 58.6 8.4e-175 610.5
Bma01g00695 . 13 467 MLO family AT2G17480 64.0 4.3e-163 571.6
Bma15g00899 . 4 298 MLO family AT2G17480 67.2 7.2e-110 394.8
Bma01g00695 . 13 369 MLO family AT1G42560 65.9 8.7e-133 470.3
Bma15g00911 CCT 28 380 MLO family AT1G42560 59.1 6.3e-115 411.0
Bma09g00238 . 28 439 MLO family AT1G42560 50.8 9.1e-106 380.6
Bma07g01505 BCT,CCT,ECH 6 378 MLO family AT1G42560 50.1 3.6e-94 342.0
Bma15g00899 . 28 297 MLO family AT1G42560 60.2 3.8e-88 322.0
Bma15g00911 CCT 5 380 MLO family AT5G65970 69.4 4.6e-147 518.1
Bma09g00238 . 5 439 MLO family AT5G65970 56.3 2.8e-128 455.7
Bma01g00695 . 7 369 MLO family AT5G65970 62.6 8.1e-128 454.1
Bma15g00899 . 5 298 MLO family AT5G65970 66.7 3.2e-108 389.0
Bma07g01505 BCT,CCT,ECH 2 378 MLO family AT5G65970 52.3 1.1e-103 374.0
Bma14g00277 . 3 547 MLO family AT5G53760 66.1 2.7e-202 701.8
Bma07g01182 . 9 509 MLO family AT5G53760 56.6 6.4e-164 574.3
Bma05g00907 . 3 149 MLO family AT5G53760 52.0 5.6e-43 172.6
Bma03g00332 CCT,ECH 5 502 MLO family AT2G39200 69.8 1.8e-198 689.1
Bma08g00944 CCT,ECH 4 526 MLO family AT2G39200 65.5 3.6e-191 664.8
Bma07g01505 BCT,CCT,ECH 8 513 MLO family AT2G39200 64.6 4.4e-189 657.9
Bma11g00163 CCT,ECH 9 572 MLO family AT2G39200 58.7 1.7e-180 629.4
Bma07g00138 . 8 544 MLO family AT2G39200 58.8 1.4e-171 599.7
Bma01g00695 . 13 462 MLO family AT2G39200 51.3 2.2e-124 443.0
Bma15g00899 . 27 296 MLO family AT2G39200 51.0 9.9e-72 268.1
Bma08g00426 . 5 424 MLO family AT4G24250 50.9 9.6e-106 380.6
Bma14g00277 . 3 547 MLO family AT1G26700 63.7 1.6e-191 666.0
Bma07g01182 . 5 487 MLO family AT1G26700 59.0 4.9e-161 564.7
Bma05g00907 . 3 149 MLO family AT1G26700 50.7 6.0e-42 169.1
Bma08g00426 . 1 424 MLO family AT2G44110 59.6 1.2e-137 486.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011947 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma05g00907 Bma_Chr05 FPKM 0.031631 0.154839 7.277078 8.46741 35.538227 33.753117 37.835651 0.0 0.0 0.0