Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00909 ATGGGTCTGAGAAATCATGTATTTCTGCTGCTTTTCACTTTCCAGTTTTCAGTGATCGCCGGAGAGACGAACACTCAGGACTTTATGTATCTGACATCTCTGAAGGGGGAGTTGAAAAACACTCCAAATAACTGGGTGGGATCGGATCCTTGTAACAGCGGCTGGGTCGGAATTTGGTGCAACAATTCACGCGTAACCACGATAACATTATCCAGTATAGGTCTAACTGGCAGCCTATCCGATGAGATTGCGTCATTGTCCGAGTTACAAACTCTGGATCTATCTGGCAATAATGGATTGACGGGGATGATTCCTTCAGCGATTGGAAATTTGACAAAGCTATCGAACCTAATTCTAGTTGGATGTAATTTTTTTGGTGCCATTCCTGCTTCTATTGGATCTCTACAAAACCTGGTTTTCCTATCTTTGAATTCAAATAGCTTCAGCGGACGGATCCCGCCTTCCATTGGTAAACTTTCCAAGCTCTTTTGGCTAGACCTGGCTGACAATCAGCTTGACGGACCAATCCCAGTTTCGAATGGGAGCACACCGGGCCTAGATATGCTGCTACATGCAAAGCACTTTCATCTTGGGCAGAATAAGCTCTCGGGTCCAATTCCGTCCCAACTCTTTAACTCAAGCATGAATCTGATACATGTTCTCTTTGATGGTAATAAGCTGTCTGGAAGCATCCCTTCCACCCTTGGACTCGTGACGACCCTGGAGGTGGTGCGGCTCGATGGAAATATGCTGAGTGGACCAGTGCCCTCTAGTTTTCGGAATCTTACCAGCGTGAGTCAGCTATATCTGTCCAACAATCGGTTGACTGGTCCAATTCCCGACTTAACCGCCCTGAATCATCTTACCTATCTGGACATGAGCAATAATTCATTTGATGTTTCGGATATTCCCCCTTGGTTTTCGACTTTAGAATCATTGACAACACTAATGATGCAAAGAACCCAACTCGCTGGACAACTCCCTGTGGATTTATTCAGCCGACCTAATTTGCAGACTGTAGTACTTAGCCAGAACCAGGTGAATGGTACCTTGACTATTGGCTCCTTCAGTAATCAACTGGAACTTATTGATTTGCGTATTAACTTGATATCTGAGGTTGACCCAGGAAGCTATAGTTCCATCTTGATACTCGTTGATAATCCCATTTGTCTGGAAGGAGGATCATCCCATACTTACTGCACAGTTTCCACGACCAACTCGTCAGAATATTCAACTCCTCCATCGAATAACTGTTTGCCATCGCCTTGCAGCTCAAATCAGATTTCTAGTCCCAACTGCATATGTGCACACCCATATACAGGCACTCTTTTCTTCAGAGGTCCTACCTTTTCAAACTTGCAAAATACAAGTCGTTTCGTCGATCTTCAAAACAAACTAATGGATTTTTTTCAATCCAAGAACCTTCCTGTCAATTCCGTTTCCCTTTCCAATCCTGCCTTTGACGACGCTAAGTACCTTGAATTACGCTTAGCAGTCTTTCCATCGGCCGACGATCATTTCAACAAGTCTGGAATTTCAAATATTGGTTTTGTTCTTAACAACCAGACTTTCAAGCCTCCAAAATATTTCGGACCTTTTTATTTTCACGCAGACACTTATCAGTACTTCGGAGAACCACCCTCTGAATCGGGAAAATCATCGTCGTTAAACATTGGGCTTATAATCGGAGTAGTTGCTGGTGTTTCTGTTCTGTTGGTATTGTTAGTCGCAATCGGGATATGTGCTATTTGCTATAAGAAAAGATCAAAAAGTGCTACTGGACTAAAAAGTCCTTTTGCGCAATGGGATTCATCGAAGGGAAGTGGAGACATACCTCAGTTAAAGGGGGCGAGTTGGTTTTCATATGATGAGCTGAAGAAGTACACTAATAATTTTGCAGAAGCTAATGAAATTGGATCAGGGGGCTATGGGAAGGTTTACAGGGGAACGCTACCGACAGGGAAGCTGATTGCGATCAAACGAGCTCTGAAAGAATCAATGCAGGGGGGGCTTGAGTTCAAAACTGAACTGGAGCTTCTATCAAGGGTTCATCATAAAAATCTTGTCGGCCTCTTAGGTTTTTGTTTCGAACAAGGTGAACAGATGCTGGTCTATGAATATGTTCCAAATGGTAATCTGAGGGATAGTCTTTCAGGGAAGACAGGAATAAGGTTGGACTGGACGAGGAGACTGAAAATAGCAGTGGGTGCAGCCAGAGGTATTTTGTATCTCCATGAACTTGCAAACCCTCCCATCATACACAGGGACATTAAATCAAACAACATTCTACTGGACGATAAACTAAATGCAAAAGTAGCTGATTTTGGTCTCTCCAAGCTCATGACAGACGGCGACTCGGACCACGTCACAACACAAGTCAAAGGAACGATGGGATACTTGGACCCCGAATACTACATGACACAACAGCTGACCGATAAGAGCGATGTGTATGGCTTTGGTGTACTTATGCTTGAGATAATCACTGCTAGAAAGCCAATTGAACAAGGAAAATACGTAGTGAGGCTAGTACGGCTTGCGAGGGATAACACAAAACCTCTGTACGGTCTGGAAGAAATCCTCGATCCGGCCCTTAATTCTTCAGCACTGCCAGGTTTAGAGAAGTTTGTGGACCTGGCCATGAGTTGTCTCGAAGAAACGGGAGCTAGAAGGCCTTCAATGGGAGAAGTTGTGAAACTGATAGAGAGTATTATGGTGCTTGCTGGTTTGAATCCAAATGCAGAATCTGTTTCGACGTCAGCAAGCTACGAGGAAGTGAGCAAGGGGACTGATTATAGTCCTTACAGCGACCGAGATTTCTGA 2820 44.04 MGLRNHVFLLLFTFQFSVIAGETNTQDFMYLTSLKGELKNTPNNWVGSDPCNSGWVGIWCNNSRVTTITLSSIGLTGSLSDEIASLSELQTLDLSGNNGLTGMIPSAIGNLTKLSNLILVGCNFFGAIPASIGSLQNLVFLSLNSNSFSGRIPPSIGKLSKLFWLDLADNQLDGPIPVSNGSTPGLDMLLHAKHFHLGQNKLSGPIPSQLFNSSMNLIHVLFDGNKLSGSIPSTLGLVTTLEVVRLDGNMLSGPVPSSFRNLTSVSQLYLSNNRLTGPIPDLTALNHLTYLDMSNNSFDVSDIPPWFSTLESLTTLMMQRTQLAGQLPVDLFSRPNLQTVVLSQNQVNGTLTIGSFSNQLELIDLRINLISEVDPGSYSSILILVDNPICLEGGSSHTYCTVSTTNSSEYSTPPSNNCLPSPCSSNQISSPNCICAHPYTGTLFFRGPTFSNLQNTSRFVDLQNKLMDFFQSKNLPVNSVSLSNPAFDDAKYLELRLAVFPSADDHFNKSGISNIGFVLNNQTFKPPKYFGPFYFHADTYQYFGEPPSESGKSSSLNIGLIIGVVAGVSVLLVLLVAIGICAICYKKRSKSATGLKSPFAQWDSSKGSGDIPQLKGASWFSYDELKKYTNNFAEANEIGSGGYGKVYRGTLPTGKLIAIKRALKESMQGGLEFKTELELLSRVHHKNLVGLLGFCFEQGEQMLVYEYVPNGNLRDSLSGKTGIRLDWTRRLKIAVGAARGILYLHELANPPIIHRDIKSNNILLDDKLNAKVADFGLSKLMTDGDSDHVTTQVKGTMGYLDPEYYMTQQLTDKSDVYGFGVLMLEIITARKPIEQGKYVVRLVRLARDNTKPLYGLEEILDPALNSSALPGLEKFVDLAMSCLEETGARRPSMGEVVKLIESIMVLAGLNPNAESVSTSASYEEVSKGTDYSPYSDRDF 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46955063 46960916 + Bma022030.1 Bma05g00909 82993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00909 939 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Bma05g00909 939 SUPERFAMILY L domain-like 44 375 - -
Bma05g00909 939 Gene3D Ribonuclease Inhibitor 281 418 IPR032675 -
Bma05g00909 939 SUPERFAMILY Protein kinase-like (PK-like) 618 916 IPR011009 -
Bma05g00909 939 ProSitePatterns Protein kinases ATP-binding region signature. 638 664 IPR017441 GO:0005524
Bma05g00909 939 CDD STKc_IRAK 638 903 - -
Bma05g00909 939 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 10 937 - -
Bma05g00909 939 ProSiteProfiles Protein kinase domain profile. 632 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00909 939 Gene3D Phosphorylase Kinase; domain 1 604 707 - -
Bma05g00909 939 Gene3D Transferase(Phosphotransferase) domain 1 708 915 - -
Bma05g00909 939 Gene3D Ribonuclease Inhibitor 181 280 IPR032675 -
Bma05g00909 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Bma05g00909 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 937 - -
Bma05g00909 939 MobiDBLite consensus disorder prediction 918 939 - -
Bma05g00909 939 Pfam Leucine rich repeat 240 297 IPR001611 GO:0005515
Bma05g00909 939 SMART serkin_6 632 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00909 939 Pfam Protein tyrosine and serine/threonine kinase 636 898 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00909 Bma12g00043 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00909 Bma-Chr5:46955063 Bma04g01051 Bma-Chr4:19167766 2.07E-20 dispersed
Bma02g00605 Bma-Chr2:13827397 Bma05g00909 Bma-Chr5:46955063 2.01E-54 transposed
Bma04g01239 Bma-Chr4:36567348 Bma05g00909 Bma-Chr5:46955063 0 transposed
Bma12g00043 Bma-Chr12:966690 Bma05g00909 Bma-Chr5:46955063 6.74E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66504 PF07714 PK_Tyr_Ser-Thr 8.10E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00909 - - egr:104452436 1160.21