Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00915 | ATGCTCAAGATGAAGGAGCCTCTCCTTACTAAAGCTAACAGGATCAATACTACCTCTCAACTGGCCATTGTTGGCGCCAATGTTTGCCCCATCGAAAGCCTCGACTACGAGATCGCTGAGAATGATCTTTTCAAGCAGGACTGGAGATCAAGAACAAAGACAGAGATTTTTCAATATGTTGTCCTCAAATGGACCCTTGCCCTGCTGATTGGTGTAGGCACTGGCCTTGTTGGCTTCTTCAATAACCTTGCTGTTGAAAACATAGCTGGGTTCAAACTTCTACTCAGTAACAACCTCATGCTTCAGCACAAGTTTTTTCAGGCATTTGTAGCCCTTGCTAGTTGCAACATGGTTTTGGCCATAGCTGCTTCAGCACTTTGTGCCTACATTGCTCCTGCAGCTGCTGGCTCTGGCATACCTGAAGTAAAAGCATACCTCAACGGAGTAGATGCTCATTCCATTTTGGCTCCGGCTACACTCTTTGTAAAGATATTTGGTTCCATATTTGGTGTTGCTGCTGGATTTGTTGTGGGTAAGGAAGGACCTATGGTACACACTGGTGCATGCATTGCCAATTTACTTGGACAAGGAGGCTCCCGCAAATATCACTTAACTTGGAAGTGGCTCAGGTACTTCAAAAATGATAGGGACAGGCGGGATCTGATCACCTGCGGTGCTGCTGCTGGAGTAGCGGCTGCCTTCCGTGCCCCAGTTGGTGGAGTTCTCTTCGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTTTGGAGAACCTTCTTTACCACTGCCGTAGTAGCAGTTGTGTTGAGAGGTTTCATCGTGTTTTGCCGGGGTGGAAAATGTGGACTTTTTGGTGAAGGAGGTCTTATTATGTTTGATGTCAATTCAGAACAAGTTTCTTACAGCACCCCGGATTTACTGGCAGTGGTGTTCCTTGGCGTTCTTGGTGGTGTCTTTGGAAGTCTTTACAATTATTTCGTCGACAAGGTTCTCCGCACTTATAGCATCATCAACGAGAAAGGTCCTTCCATGAAAATTCTACTTGTCGTTGCCATTTCTCTACTGACTTCTTGTTGCTCTTATGGACTTCCATGGTTCTCCATGTGCATTCCTTGCCCTGCTCACTTGGAGGATCAGTGTCCGACTGTAGGTCGCACCGGTAACTACAAGGAATTTCAATGTCCTCCTAACCATTACAATGACCTTGCTTCCCTTTTACTCAACACCAACGACGATGCAATTCGCAACCTGTTGAGCCCTGGTTCCGATAAGGAGTTTCACTTCTCTACCCTTGTAGTTTTCTTTGCTGCCATCTACCTTCTCGGAATTATCACTTACGGAATAGCTATTCCCTCTGGCCTTTTCATTCCTGTAATACTTGCCGGAGCATCATACGGCCGCCTTGTGGGGACACTCGTTGGCTCTCTATCAAATCTTGATGTGGGTCTCTTTGCTCTCCTCGGAGCTGCTTCTTTTCTCGGCGGGACCATGCGAATGACTGTTTCTCTCTGTGTCATCCTTCTTGAACTTACCAATGATCTATTGATGCTACCATTGGTTATGCTTGTTCTTCTGATTTCGAAAACTGTGGCAGACTGTTTCAACAAAGGTGTCTATGATCAAATTGTCAAGATGAAGGGGCTGCCATACTTGGAAGCTCATGCAGAGCCATATATGAGACACTTGGTTGCAAGTGATGTTGTGTCTGGCCCGCTGATTACATTCTCCGGAGTAGAAAAAGTCGGAACCATAATGTATGCTTTGAAGATGACAAATCATAATGGATTCCCCGTTATCGACGAGCCTCCATTCACGGAAGCTCCAGAGCTGTGCGGGCTTGTTCTGAAGTCTCATCTTCTTGTTTTGCTCAAAGGGAAGAAATTCACAAAGCAGAAAGTGAGTACTGGATCGACAATCATCCGGAGTTTCAAAGCTCACGATTTTGCTAAAGCGGGATCGGGCAAGGGGATGAAGCTGGAGGACTTGGATATCAAAGATGATGAGATGGAGATGTATGTAGATCTTCATCCTATTACTAATACATCCCCCTACACTGTAGTGGAAACAGTGTCTCTGGCTAAAGCGGCTATTCTCTTCCGGGAACTTGGCCTTCGCCACTTGATGGTCGTGCCGAAGACACCAGGGAGGCCTCCGATTGTCGGAATCCTTACCCGACACGACTTCATGCCGGAGCATGTGTTAGGACTTTACCCACATTTCAATCCTCATAAGTAG | 2241 | 46.45 | MLKMKEPLLTKANRINTTSQLAIVGANVCPIESLDYEIAENDLFKQDWRSRTKTEIFQYVVLKWTLALLIGVGTGLVGFFNNLAVENIAGFKLLLSNNLMLQHKFFQAFVALASCNMVLAIAASALCAYIAPAAAGSGIPEVKAYLNGVDAHSILAPATLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIVFCRGGKCGLFGEGGLIMFDVNSEQVSYSTPDLLAVVFLGVLGGVFGSLYNYFVDKVLRTYSIINEKGPSMKILLVVAISLLTSCCSYGLPWFSMCIPCPAHLEDQCPTVGRTGNYKEFQCPPNHYNDLASLLLNTNDDAIRNLLSPGSDKEFHFSTLVVFFAAIYLLGIITYGIAIPSGLFIPVILAGASYGRLVGTLVGSLSNLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLMLPLVMLVLLISKTVADCFNKGVYDQIVKMKGLPYLEAHAEPYMRHLVASDVVSGPLITFSGVEKVGTIMYALKMTNHNGFPVIDEPPFTEAPELCGLVLKSHLLVLLKGKKFTKQKVSTGSTIIRSFKAHDFAKAGSGKGMKLEDLDIKDDEMEMYVDLHPITNTSPYTVVETVSLAKAAILFRELGLRHLMVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHFNPHK | 746 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 47078947 | 47083700 | - | Bma022038.1 | Bma05g00915 | 82999 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00915 | 746 | Gene3D | - | 554 | 736 | IPR046342 | - | |
Bma05g00915 | 746 | SUPERFAMILY | Clc chloride channel | 41 | 556 | IPR014743 | - | |
Bma05g00915 | 746 | PRINTS | Chloride channel signature | 227 | 246 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | PRINTS | Chloride channel signature | 163 | 182 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | PRINTS | Chloride channel signature | 540 | 554 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | PRINTS | Chloride channel signature | 132 | 149 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | PRINTS | Chloride channel signature | 502 | 521 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | PRINTS | Chloride channel signature | 452 | 472 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | PRINTS | Chloride channel signature | 484 | 500 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | ProSiteProfiles | CBS domain profile. | 680 | 744 | IPR000644 | - | |
Bma05g00915 | 746 | SUPERFAMILY | CBS-domain pair | 557 | 731 | IPR046342 | - | |
Bma05g00915 | 746 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 566 | 733 | - | - | |
Bma05g00915 | 746 | Pfam | CBS domain | 682 | 730 | IPR000644 | - | |
Bma05g00915 | 746 | Pfam | Voltage gated chloride channel | 120 | 534 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bma05g00915 | 746 | PRINTS | Plant CLC chloride channel signature | 262 | 272 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bma05g00915 | 746 | PRINTS | Plant CLC chloride channel signature | 37 | 45 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bma05g00915 | 746 | PRINTS | Plant CLC chloride channel signature | 248 | 256 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bma05g00915 | 746 | PRINTS | Plant CLC chloride channel signature | 280 | 287 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bma05g00915 | 746 | PRINTS | Plant CLC chloride channel signature | 404 | 420 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bma05g00915 | 746 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 4 | 746 | - | - | |
Bma05g00915 | 746 | Gene3D | Clc chloride channel | 55 | 553 | - | - | |
Bma05g00915 | 746 | SMART | cbs_1 | 573 | 626 | IPR000644 | - | |
Bma05g00915 | 746 | SMART | cbs_1 | 684 | 735 | IPR000644 | - | |
Bma05g00915 | 746 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC-C | 4 | 746 | - | - | |
Bma05g00915 | 746 | CDD | ClC_6_like | 32 | 553 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma04g00792 | Bma05g00915 | BCT | |
Bma05g00915 | Bma12g00031 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00307 | Bma-Chr1:2527778 | Bma05g00915 | Bma-Chr5:47078947 | 0 | transposed | |
Bma04g00792 | Bma-Chr4:9004903 | Bma05g00915 | Bma-Chr5:47078947 | 1.18E-11 | transposed | |
Bma14g01376 | Bma-Chr14:25654138 | Bma05g00915 | Bma-Chr5:47078947 | 0 | transposed | |
Bma12g00031 | Bma-Chr12:877510 | Bma05g00915 | Bma-Chr5:47078947 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00915 | K05016 | - | jre:108988922 | 1247.65 |