Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g00920 | ATGTTCTTTGCGATTTTTATAATTTGTTTATCGGGCATTTGCGTTGTGGATTTGGTTTGTGCCTTGTTTACAGATCTGATATCGGAGCGAAACGTTTTTCCGTCAGCAATGGCCCTAGTCTTGCATGCAGGAAAGACAAATAAAAATAGTTTTAAGACCCTCATTGCTGCAGAGTATGTTGGTGTTCAAGTTGAACTCGCCTCAAATTTTGAGATGGGTGTTTCAAATAAAACTCCAGAATTTATTAAGATGAACCCTATTGGGAAGGTCCCTGTGCTGGAGACGCCTGATGGTTCCATATTTGAGAGCAATGCCATTGCACGATACGTTTCTCACTTGAAGACTGAATGCAATCTATTTGGCTCTTCTCTTATTGATTATGGCCATGTTGAACAGTGGATTGATTTTGCATCATTAGAGATTGATGTTCACATTCTGACTTGGTTTAGACCAAGAAGGGGTTTCGCTCCATACCTTCCTCCTGTTGAGGAAGCTGCTATTACTGCGTTGAAGAGAGCGTTGGGTGCTTTGAACTTTCACCTTGCTTCAAACACATATCTTGTGGGGAACTCTGTGACGCTGGCTGACATCATAATGACATGTAACTTGTATTTGGGTTTCACTCAGTTAATGACCAAGAGCTTTACCTCTGAGTTCCCTCACGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCAAACTTCAAAAAGATAATTGGTGAAGTTAAGCAAACTGAGTCTGTTCCACCAATTCAATCTGTGAAAAAGCCTTCCCAGCCTAAAGAACCTGTTAAGCCAAAGCCTAAGGATGAGCCGAAGAAAGAAGTTAAGAAAGAAGAGGCAAAGGAAAAGCCCAAGGTGGAAGCTGGTGAAGAAGAAGAAGAGGCGCCAAAACCAAAGCCCAAAAATCCCCTTGATCTATTGCCTCCCAGTCCAATGATTCTGGATGAATGGAAACGGCTTTACTCTAACACAAAGACAAACTTTCGCGAGGTTGCAATTAAAGGATTCTGGGACATGTATGATCCTGAGGGTTATTCTCTTTGGTTCTGTGATTACAAGTACAACGATGAGAATACTGTTTCATTCGTAACACTTAACAAAGTTGGTGGATTTCTGCAACGCATGGATCTAGCCCGAAAGTATGCATTTGGGAAGATGCTCGTGATTGGTTCAGAAGCACCATTTAAAGTGAAAGGGCTATGGCTTTTCCGCGGCAAAGAGATACCACAATTTGTGATCGACGAGTGCTACGATATGGAACTTTACGAATGGACAAAGGTGGATATCTCTGACGAAGCCCAGAAGGAGCGCGTGAGCCAGATGATCGAAGATCACGAGCCATTTGAGGGAGATGCTCTTTTGGATGCAAAATGTTTCAAGTGA | 1386 | 42.42 | MFFAIFIICLSGICVVDLVCALFTDLISERNVFPSAMALVLHAGKTNKNSFKTLIAAEYVGVQVELASNFEMGVSNKTPEFIKMNPIGKVPVLETPDGSIFESNAIARYVSHLKTECNLFGSSLIDYGHVEQWIDFASLEIDVHILTWFRPRRGFAPYLPPVEEAAITALKRALGALNFHLASNTYLVGNSVTLADIIMTCNLYLGFTQLMTKSFTSEFPHVERYFWTLVNQPNFKKIIGEVKQTESVPPIQSVKKPSQPKEPVKPKPKDEPKKEVKKEEAKEKPKVEAGEEEEEAPKPKPKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFKVKGLWLFRGKEIPQFVIDECYDMELYEWTKVDISDEAQKERVSQMIEDHEPFEGDALLDAKCFK | 461 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 47112617 | 47115302 | + | Bma022044.1 | Bma05g00920 | 83004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g00920 | 461 | MobiDBLite | consensus disorder prediction | 249 | 309 | - | - | |
Bma05g00920 | 461 | SUPERFAMILY | GST C-terminal domain-like | 118 | 250 | IPR036282 | - | |
Bma05g00920 | 461 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 301 | 461 | IPR001662 | GO:0003746|GO:0006414 | |
Bma05g00920 | 461 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 123 | 251 | IPR010987 | - | |
Bma05g00920 | 461 | Pfam | Glutathione S-transferase, N-terminal domain | 46 | 111 | IPR004045 | - | |
Bma05g00920 | 461 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 301 | 461 | IPR036433 | GO:0003746|GO:0006414 | |
Bma05g00920 | 461 | PANTHER | - | 37 | 461 | - | - | |
Bma05g00920 | 461 | CDD | GST_C_EF1Bgamma_like | 126 | 246 | - | - | |
Bma05g00920 | 461 | SFLD | Glutathione Transferase (cytosolic) | 40 | 226 | IPR040079 | - | |
Bma05g00920 | 461 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 37 | 461 | IPR044628 | GO:0004364 | |
Bma05g00920 | 461 | Pfam | Elongation factor 1 gamma, conserved domain | 300 | 408 | IPR001662 | GO:0003746|GO:0006414 | |
Bma05g00920 | 461 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 37 | 118 | IPR004045 | - | |
Bma05g00920 | 461 | Gene3D | Glutaredoxin | 36 | 110 | - | - | |
Bma05g00920 | 461 | SUPERFAMILY | Thioredoxin-like | 35 | 117 | IPR036249 | - | |
Bma05g00920 | 461 | SFLD | Main (cytGST) | 40 | 226 | - | - | |
Bma05g00920 | 461 | MobiDBLite | consensus disorder prediction | 260 | 301 | - | - | |
Bma05g00920 | 461 | SUPERFAMILY | eEF1-gamma domain | 301 | 461 | IPR036433 | GO:0003746|GO:0006414 | |
Bma05g00920 | 461 | Pfam | Glutathione S-transferase, C-terminal domain | 162 | 233 | IPR004046 | - | |
Bma05g00920 | 461 | Gene3D | - | 117 | 252 | - | - | |
Bma05g00920 | 461 | SMART | EF1G_2 | 300 | 408 | IPR001662 | GO:0003746|GO:0006414 | |
Bma05g00920 | 461 | CDD | GST_N_EF1Bgamma | 39 | 113 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g00920 | Bma-Chr5:47112617 | Bma14g01123 | Bma-Chr14:14207084 | 1.75E-12 | dispersed | |
Bma12g00028 | Bma-Chr12:841934 | Bma05g00920 | Bma-Chr5:47112617 | 1.24E-150 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g00920 | K03233 | - | zju:107412556 | 680.248 |