Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00983 CAGATTAAGAGGGAAATAGCCACACTGAAGCTTCTCAAACATCCTAATGTAGTCAAGCTGCACGAGGTGTTGGCCAGTAAAACCAAGATTTACATAGTCCTGGAGTATGTGACTGGAGGGGAATTATTTGACAGAATTGCATTTAACGGGAAGCTAAAGGAAGACGAAGGCAGGAAGCTCTTCCAGCAATTAATTGACGGTGTGGGCTACTGTCACACCAAAGGTGTTTTCCACAGGGATCTCAAGTTAGAGAACTTACTTGTTGACGCCAACGGAAACCTCAAGATATCTGATTTCGGCCTTAGTGCGCTGCCTCAGCATGATGGATTACTTCACACAACCTGTGGAAGTCCAAATTATGTTGCACCGGAGATACTAGCAAACAGAGGGTATGATGGTGCCATCTCAGACGTTTGGTCATGTGGTGTAATTTTGTATGTTATTCTTACGGGATCTCTCCCTTTTGACGATAGAAATCTCGTTGTACTTTATCATAAGATATTCAAGTGTGAAGTAAATTTACCCAAATGGCTGTCACCAGGAGCGCGAAACTTGATAAGAAGCATTCTTGACCCCAACCCCATTTCTCGGATTACAATTCCAGGTATTAAAGCAGACAAATGGTTTAAGAAAGACTACAACCCTACGTATCCTGAAGAGGAAGAAGAGGAGTACAATAACACTCACTCAAAAGCCACACCAATAAATGAAGGGGCATCTGAGGGTGAAACGATTGAAAAATCTTCTACGCTCATAAATGCATTTCAGTTGATTGGAATGTCCTCGTGCCTTGATCTTTCAGGCTTCTTTGAGAAAGAGGATATTTGCGAGAGGAAGATCAGATTTACATCCAACCATTCCCCGACAGATCTTCTTGAGAGGATTGAGGATATTGTAACCGAGATGGGATTCGGTGTTCAAAAGAAAAATGGAAAGTTGAGAGTGGTGCAAGAGCACAATGGTCTAACAAGTCCGGGCAGTCTCTCAGTCGTAGCCGAGGTATTTTTGATAAGCCACTCGTTGTATGTTGTTGAGCTACGAAAGACTTGTGGAGATTCATCAGCCTATAGACAGGTCTCCTCTCTCTCTCTCCCCCTCTCTCTCTCTCTCTCTCTCTAA 1119 43.25 QIKREIATLKLLKHPNVVKLHEVLASKTKIYIVLEYVTGGELFDRIAFNGKLKEDEGRKLFQQLIDGVGYCHTKGVFHRDLKLENLLVDANGNLKISDFGLSALPQHDGLLHTTCGSPNYVAPEILANRGYDGAISDVWSCGVILYVILTGSLPFDDRNLVVLYHKIFKCEVNLPKWLSPGARNLIRSILDPNPISRITIPGIKADKWFKKDYNPTYPEEEEEEYNNTHSKATPINEGASEGETIEKSSTLINAFQLIGMSSCLDLSGFFEKEDICERKIRFTSNHSPTDLLERIEDIVTEMGFGVQKKNGKLRVVQEHNGLTSPGSLSVVAEVFLISHSLYVVELRKTCGDSSAYRQVSSLSLPLSLSLSL 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48338294 48341503 + Bma022133.1 Bma05g00983 83067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00983 372 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00983 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Bma05g00983 372 PANTHER CBL-INTERACTING PROTEIN KINASE 21 1 360 - -
Bma05g00983 372 Pfam NAF domain 250 308 IPR004041 GO:0007165
Bma05g00983 372 MobiDBLite consensus disorder prediction 219 243 - -
Bma05g00983 372 SMART serkin_6 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00983 372 PANTHER - 1 360 - -
Bma05g00983 372 Pfam Protein kinase domain 2 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00983 372 MobiDBLite consensus disorder prediction 229 243 - -
Bma05g00983 372 ProSiteProfiles NAF domain profile. 247 271 IPR018451 GO:0007165
Bma05g00983 372 CDD CIPK_C 253 359 - -
Bma05g00983 372 Gene3D Phosphorylase Kinase; domain 1 1 41 - -
Bma05g00983 372 SUPERFAMILY Protein kinase-like (PK-like) 2 226 IPR011009 -
Bma05g00983 372 Gene3D Kinase associated domain 1, KA1 246 369 - -
Bma05g00983 372 Gene3D Transferase(Phosphotransferase) domain 1 42 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00983 Bma-Chr5:48338294 Bma11g00896 Bma-Chr11:34141643 1.48E-132 dispersed
Bma05g00983 Bma-Chr5:48338294 Bma14g00807 Bma-Chr14:9006692 1.87E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66508 PF00069 Pkinase 1.50E-58 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00983 K07198 - jre:108981583 539.65