Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00994 CTAGTTCGAATGGAAATTCCACCGGCTGAGGAGCTTCTGAGGAAGATCCATGAGCTCGAAGCGAGTCACGCTCAACTAAAGGAAGAGATGACGAAGCTCGTCCTATCTGGAGCTACTCCCGATTTGAGAACCGACCGGAAAAGTCATCAGCACCACCGGTCGCATTCCGTATCACCGCAGCGGTCAAGGTTATCAGGGGGCAGAAGGAAAGGCGGTGGAGTTGGGGGTTTAGACTGTCCGAATGCTGCGACAGCTTGGAAGCAAGGCTCTGCTTCTTTTAAGCATTCATCTCCGCTTCAGAGGGAAAGCCGTAGTCACGATTCTCTATTCGTCGGCGAAGAAGATGAAGGAAGAAGTGGAGGGGGTCCTTTGCCGGTGAATTTCACTGATAGCCAATATCTGAATATTTTGCAGTCTATGGGGCAGTCTGTTTATATATTTGATCTAAATGGTCGAATAATCTACTGGAATCGAACTGCTGAAAAGACATTCGGGTATTCTGAGGCAGAAGCCCTTGGTCAGGATTTAATTGAGATTCTGGCTGATGCCCAAGATTATCCAGTAGCAAATGATATTATCCGCCGTGTCACTTCAGGGGAGAGTTGGACTGGGCAGTTCCCTGTAAAGAACAGAAGGGGGGACAGATTTTTGGTCGTTGCAACCAATACCCCATTCTATGATGACGATAATGCCTTGATTGGTATTATTTGTGTCTCGAGCAATACCCGGTCGTTTGAGGAAGTCAAAGTTGGGTTGAGTCCAAAACATTCAGAACTAGATTCAAGCTGTAGCCGACCCCGAAGTATTGTCAATACTAAACTTGGCCTTGATCCCCAACAGCCTTTACAAGTCGCTATTGCATCAAAACTATCTAACTTGGCATCCAAGGTAAGCAACAAAGTGAAGTCAAAGATACGGACAGGAGAAAATATCTCTGATCGTGAAGGTGGAAGTGGAGACAGTCATCATTCTGATCATGGTTCTGCTGATGGGATTCTCCCTGATCATAGAGAAGATGCAAATTCAAGTGGAGCTAGCACACCACGTGGAGATTTACCCCCTACTCCCTTTGGTGTATTATCATCTATGGAGGAGAAGTCCGTTGGAAAATCCTCTAGAGAATCAGGCGATGATGGTGAAGAAAAGCCTGCAATTCACAAGATTATTACCTCAAAGGCGGAGGCATGGATTAGTAAGAAAGGCATATCATGGCCGTGGAAAGGGAATGAACGAGAAGGATCAGAGGCAAGGAATACCCGTTTTGGTTGGCCCTGGTTGCACAATGATCAAGAGGCAGAATTACAGAACTATAAGAATTCCTCATCCGGATTGAAACAAGAGAACCAAACAAATGAAGGTAATCGTGTGGTCAATAACGAGGCCACAGGATCTTGGTCATCATTCAATGTTAACAGTACAAGCAGTGCGAGCAGCTGTGGTAGTACCAGCAGTAGTGCGATTAATAAAGTCGACATGGACACCGACTGCTTGGATTTTGAAATCTTGTGGGAGGACTTGACTATTGGAGAGCAAATTGGACAAGGCTCTTGTGGAACTGTATATCACGCCCTGTGGTATGGATCAGATGTTGCTGTCAAAGTGTTCTCTAGAGAAGAATATTCAGAAGATGTGATACTTTCATTCAGACAGGAGGTATCTCTAATGAAAAAGCTTCGGCATCCCAATATTCTTCTCTTCATGGGCGTCGTGGCTTCAGCGCATCGGCTTTGCATTGTGACAGAGTTCCTTCCACGGTTCGTCCTCAAATTTCACTTTGAAAATCCTCATACTGATTTATGGTCTTATAAATGCAGTGGAAGTTTATTTCGTCTACTTCAGAAAAGCATTGCCAAACTAGATTGGAGACGGCGGGTTCATATGGCATTCGATATAGCGCGAGGTATGAATTATCTTCACCATTGCAATCCACCCATCATTCACCGCGACTTGAAATCCTCCAATCTTCTAATCGATAAAAACTGGACAGTGAAGGTTGGTGACTTTGGCCTGTCGCGTCTCAAATATGACACTTATCTTTCAACTAAGACTGGAAAGGGAACGCCACAATGGATGGCTCCGGAAGTTCTACGCAACGAACCTTCGGATGAAAAGTCTGACATATACAGTTTTGGAGTTATATTGTGGGAGCTTGCCACTGAAAAGATCCCTTGGGATAATCTTAATTCAATGCAGATGCAAATAATAAAATGCTTGAAATTCTATCAAATGTTGGATGAAAATTCTGAAGTTAGAATGCTTGTCATTGGCATATTATTTGTGATTGGGGCAGTCGGGTTCATGAACCAGCGGCTTGAAATTCCGAAAGACGTGGATCCGCAGTGGGCTTCCATGATTGAGAGCTGCTGTCACAGTGATCCAGCTAGCAGGCCGACATTCCAGGAACTCCTAGAAGAGCTGAGAGAGCTTCAGAGAAAATACACACTTCAATTTCAGGCAGCTAGATCGGGATCGGGCGGCACCGGAGAAAATGCGCAGAAGGAGCTATAG 2508 45.06 LVRMEIPPAEELLRKIHELEASHAQLKEEMTKLVLSGATPDLRTDRKSHQHHRSHSVSPQRSRLSGGRRKGGGVGGLDCPNAATAWKQGSASFKHSSPLQRESRSHDSLFVGEEDEGRSGGGPLPVNFTDSQYLNILQSMGQSVYIFDLNGRIIYWNRTAEKTFGYSEAEALGQDLIEILADAQDYPVANDIIRRVTSGESWTGQFPVKNRRGDRFLVVATNTPFYDDDNALIGIICVSSNTRSFEEVKVGLSPKHSELDSSCSRPRSIVNTKLGLDPQQPLQVAIASKLSNLASKVSNKVKSKIRTGENISDREGGSGDSHHSDHGSADGILPDHREDANSSGASTPRGDLPPTPFGVLSSMEEKSVGKSSRESGDDGEEKPAIHKIITSKAEAWISKKGISWPWKGNEREGSEARNTRFGWPWLHNDQEAELQNYKNSSSGLKQENQTNEGNRVVNNEATGSWSSFNVNSTSSASSCGSTSSSAINKVDMDTDCLDFEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSREEYSEDVILSFRQEVSLMKKLRHPNILLFMGVVASAHRLCIVTEFLPRFVLKFHFENPHTDLWSYKCSGSLFRLLQKSIAKLDWRRRVHMAFDIARGMNYLHHCNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKYDTYLSTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWDNLNSMQMQIIKCLKFYQMLDENSEVRMLVIGILFVIGAVGFMNQRLEIPKDVDPQWASMIESCCHSDPASRPTFQELLEELRELQRKYTLQFQAARSGSGGTGENAQKEL 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48438779 48444173 + Bma022147.2 Bma05g00994 83078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00994 835 ProSiteProfiles PAS repeat profile. 129 200 IPR000014 -
Bma05g00994 835 Gene3D Transferase(Phosphotransferase) domain 1 604 833 - -
Bma05g00994 835 CDD PAS 140 238 IPR000014 -
Bma05g00994 835 SUPERFAMILY PYP-like sensor domain (PAS domain) 131 238 IPR035965 -
Bma05g00994 835 MobiDBLite consensus disorder prediction 42 81 - -
Bma05g00994 835 CDD STKc_MAP3K-like 512 799 - -
Bma05g00994 835 Gene3D Phosphorylase Kinase; domain 1 499 583 - -
Bma05g00994 835 Gene3D PAS domain 141 245 - -
Bma05g00994 835 MobiDBLite consensus disorder prediction 299 383 - -
Bma05g00994 835 SMART serkin_6 506 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00994 835 Pfam PAS fold 132 238 IPR013767 GO:0006355
Bma05g00994 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Bma05g00994 835 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 38 748 - -
Bma05g00994 835 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 759 826 - -
Bma05g00994 835 SMART pas_2 131 197 IPR000014 -
Bma05g00994 835 ProSiteProfiles Protein kinase domain profile. 506 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g00994 835 MobiDBLite consensus disorder prediction 367 383 - -
Bma05g00994 835 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 38 748 - -
Bma05g00994 835 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 759 826 - -
Bma05g00994 835 Coils Coil 427 447 - -
Bma05g00994 835 SUPERFAMILY Protein kinase-like (PK-like) 493 805 IPR011009 -
Bma05g00994 835 MobiDBLite consensus disorder prediction 302 337 - -
Bma05g00994 835 TIGRFAM sensory_box: PAS domain S-box protein 132 237 IPR000014 -
Bma05g00994 835 Pfam Protein tyrosine and serine/threonine kinase 506 806 IPR001245 GO:0004672|GO:0006468
Bma05g00994 835 Coils Coil 9 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00994 Bma-Chr5:48438779 Bma07g01640 Bma-Chr7:51999009 1.62E-123 dispersed
Bma05g00994 Bma-Chr5:48438779 Bma10g00075 Bma-Chr10:773719 1.57E-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66509 PF07714 PK_Tyr_Ser-Thr 3.90E-56 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00994 - - qsu:111989009 1073.54