Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00995 ATGCTTCAGGCATTGATGAATCTTCTCTCTCTATGCTGGAAGCCATTCGGCCATGATGGTGAAAGATTGGACTCTGTTGGAGTTTTCGGAGCCAATTCTGGTGGAAGAGACGGCAAAGATGGCTTGCTTTGGTTCCGTGATTTTGGCAATTACGCATCCGGCGAATTCTCCATGGCCGTGGTGCAGGCCAACCAGGTTCTCGAGGACCAGAGTCAGATTGAATCGGGACCTTTTGGGACCTTCGTTGGCGTCTATGATGGACATGCCGGCCCTGAGGCTGCCCGATATGTTTGTGATAACTTGTTTGGGCATTTCCAAGCAATATCAACTGAATTGAATGGAGCTGTGACTCCCGAATCAATTCAGAATGCTTTTCGCCAAACAGAGGATGGGTTCGCTACCTTTGTTTCAGAGCTATTGAGTACTCGGCCCCAGTTAGCAACTGTTGGATCTTGTTGTTTAGTTGGAATCATATGTCAACAGACTCTCTTTGTGGCAAACGTTGGAGACTCCCGGGTTGTACTGGGCAAAAAAGTTGGCATCACCGACGAGATTGCTGCAATCCAGTTGTCAGCAGAACATAACGCAAATCAGGAAGATGTTAGGCAGGAATTGAAAGAACTTCATCCAAATGATCCTCAAATTGTTGTCCTCAAGCATGGAGTTTGGAGAGTAAAAGGCATCATACAGTGTATTAGTGAAATTACAAATACTCATTTGAATTGTTGTGTGAATATTGTAATGCCTCTCGTGTTTACTTTTGGTTTTTTTCTTGACATGTTTCTTTCCAATTTGTGTTGGTTGTCTATGCAGGTTTCTAGATCTATAGGCGATCTCTACTTGAAACATTCCCATTTCAACAATGAAAGGATTAATGGAAAATTCAGACTTCCTGAACCAATAAGCATGCCAATTTTAAGTTCTGTTCCCGAAATTATTACGCATTCCATCCATCCAAATGACTCTTTTCTTATATTTGCATCTGATGGACTATGGGAACACTTGAGTAATGAAAAAGCTGTGGAGATAGTTCATAGTCATCCACGTTCAGGAAGTGCAAAAGGGCTTGTGAAGGCTGCACTTCAAGAAGCAGCCAGAAAACGAGAAATGCGATACTCGGATCTTCGAAAAATTGACAAGAAGGTTAGACGCCATTTCCATGACGATATATCTGTCATTGTTTTATTCTTAAACCACGATCGGATATCCAGAGGCATGGGTCTTGACCGTCCATTATCAATTCGAAATGCTTCGAATCCATAA 1263 42.6 MLQALMNLLSLCWKPFGHDGERLDSVGVFGANSGGRDGKDGLLWFRDFGNYASGEFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHAGPEAARYVCDNLFGHFQAISTELNGAVTPESIQNAFRQTEDGFATFVSELLSTRPQLATVGSCCLVGIICQQTLFVANVGDSRVVLGKKVGITDEIAAIQLSAEHNANQEDVRQELKELHPNDPQIVVLKHGVWRVKGIIQCISEITNTHLNCCVNIVMPLVFTFGFFLDMFLSNLCWLSMQVSRSIGDLYLKHSHFNNERINGKFRLPEPISMPILSSVPEIITHSIHPNDSFLIFASDGLWEHLSNEKAVEIVHSHPRSGSAKGLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDRISRGMGLDRPLSIRNASNP 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48448068 48450962 + Bma022148.2 Bma05g00995 83079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00995 420 Gene3D - 48 404 IPR036457 -
Bma05g00995 420 ProSiteProfiles PPM-type phosphatase domain profile. 52 397 IPR001932 -
Bma05g00995 420 PANTHER ALPHABET, ISOFORM E-RELATED 3 239 - -
Bma05g00995 420 SMART PP2C_4 42 395 IPR001932 -
Bma05g00995 420 PANTHER ALPHABET, ISOFORM E-RELATED 270 417 - -
Bma05g00995 420 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bma05g00995 420 CDD PP2Cc 56 397 IPR001932 -
Bma05g00995 420 SUPERFAMILY PP2C-like 64 398 IPR036457 -
Bma05g00995 420 Pfam Protein phosphatase 2C 80 366 IPR001932 -
Bma05g00995 420 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 270 417 - -
Bma05g00995 420 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01123 Bma05g00995 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00474 Bma-Chr4:3985294 Bma05g00995 Bma-Chr5:48448068 1.45E-124 dispersed
Bma04g01123 Bma-Chr4:27103114 Bma05g00995 Bma-Chr5:48448068 7.67E-167 dispersed
Bma05g00995 Bma-Chr5:48448068 Bma08g00966 Bma-Chr8:48642062 2.11E-138 dispersed
Bma05g00995 Bma-Chr5:48448068 Bma12g00917 Bma-Chr12:40612620 1.79E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00995 K01102 - zju:107419003 584.719