Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01004 TTAGGTTGTAAACCTATTTCTATTTCGATGGATCCATCCAACAAGTTTTCATCATATAAAGGACATTTACTTCAAGATGTTACTTCATTTGGCAAACTTATTGGACAACTATTGCACTTGGCTATCGCAAGACCAAACATCACTTATGCTGTTAATTTCTTGAGTCAATTTCTTGCAACACCACGAGATTCCAATCTTAAAGTTGTTTGTAGAATTTTTCGTTGCAACTGCAAATACTCACCTCTCATAGAATCAGATCTAAAGGAAATTGAAGAGCATGGAAACGATGAGAGGCTCGGAACGAGCATGCAAGACGTGATCGATGAGTGCAAGCTGTTTTACTTGGCCAGCCAAGAGACAACCTCCGCTCTTCTTCTTTGGACGATCATCTTATTGGGCGTCCATCAAGAATGGCAAGAAAAGGCAAGAGAAGAAGTCTTTCGAGTATTTGGCCATAATAATAAGCCCCATTTTGACGGGTTAAATCGCCTGAAAACTGTCACCGCGATTTTGTACGAGGTTTTAAGGTTGTATCCACTTGTTACAACGCTGAATCGAAAAGTGGAGAAGGAAACTAGGCTCGGAAGCATATCATTGCCGCAAGGAGTGTCAGTGACAATACCAGGTCTAATGGTCCACCACGACCGAGATTTATGGGGGGATGACGTCGGAGACTTCAAACCGGAGAGGTTTTTAGAGGGAGTTTCCAAGGCGACGAGAGGAAAAGTTTCGTTTTTTCCATTCGGGTGGGGTGCTCGGATCTGTATCGGTCAGAATTTTGCAATGGTTGAATCGAAGATGGCTATGGCTATGATTTTGCAACGCTTCTCATTCGAGATGTCCCCATTGTACGCTCACTCGCCCGGCGCATTTATTCTTCTTCAACCTCAGCATGGGGCTCATATCATCTTGAAGAAACTCTAG 924 43.18 LGCKPISISMDPSNKFSSYKGHLLQDVTSFGKLIGQLLHLAIARPNITYAVNFLSQFLATPRDSNLKVVCRIFRCNCKYSPLIESDLKEIEEHGNDERLGTSMQDVIDECKLFYLASQETTSALLLWTIILLGVHQEWQEKAREEVFRVFGHNNKPHFDGLNRLKTVTAILYEVLRLYPLVTTLNRKVEKETRLGSISLPQGVSVTIPGLMVHHDRDLWGDDVGDFKPERFLEGVSKATRGKVSFFPFGWGARICIGQNFAMVESKMAMAMILQRFSFEMSPLYAHSPGAFILLQPQHGAHIILKKL 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48510122 48514690 + Bma022158.1 Bma05g01004 83088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01004 307 Gene3D Cytochrome P450 77 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 248 257 IPR017972 GO:0005506|GO:0016705
Bma05g01004 307 Pfam Cytochrome P450 93 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 SUPERFAMILY Cytochrome P450 76 305 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PANTHER CYTOCHROME P450 72A11-RELATED 82 298 - -
Bma05g01004 307 PRINTS E-class P450 group I signature 125 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS E-class P450 group I signature 105 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS E-class P450 group I signature 168 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS E-class P450 group I signature 209 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS E-class P450 group I signature 245 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS E-class P450 group I signature 255 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS P450 superfamily signature 169 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS P450 superfamily signature 116 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS P450 superfamily signature 246 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PRINTS P450 superfamily signature 255 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma05g01004 307 PANTHER CYTOCHROME P450 FAMILY MEMBER 82 298 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01046 Bma-Chr4:19035455 Bma05g01004 Bma-Chr5:48510122 3.36E-21 dispersed
Bma05g01004 Bma-Chr5:48510122 Bma14g00217 Bma-Chr14:2655119 3.40E-159 dispersed
Bma05g01004 Bma-Chr5:48510122 Bma14g00276 Bma-Chr14:3375597 1.18E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01004 - - mnt:21407371 318.546