Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01021 ATGCAGGTTCAGGTCAATTTGGTCGGAACACAGTTTGGTGTTGCATCTCCGGAGATTCCAATGCCGTTGAATATCTCTCTGGTCAACGATGGCTACGCTTGTGGACATTCAACTCTGCAAGGGACGAGAGAAATGCACGTTTGCTGTACTCCAGACACAAATGTCAAAACAAACATAAGTATAAGCGACGAGTTCTTGCCTCGCCAAGATGGTGATCTTATAATCATGTACGATGTTACAAGAACATACGACTCGAGTTATTGGACGCAAGTTACAATCTCTAATCACAACCCTCTCGGCCGTTTGGATAGTTGGAAACTAAGCTGGGATTGGATGATGGGTGAATTCATATACTCCATGAAAGGAGCTTATCCTTCTGTTGTTGATTCTTCCGAGTGTATATTCGGCCCTCAAGGAAACCATTATCAGGGCATGGACTTTTCCGAGGTTTTGAACTGCGAAAGGCGGCCAACTATAGTCGATCTGCCACTCTCTAAGGCTAATGACACAAACCTTGGACATGTCCCGTATTGTTGCCGGAACGGAACAATCCTGCCTCCCCACATGGATCCGAGCAAGTCGATCTCATCATTTCAAATGCAAGTTTTCAAAATGCCACCAGAGCTGAACCGATCTCAGTTGACACCTCCACAAAACTGGAAAATCAATGGCAGCCTCAATCCTAGCTATCTTTGTGGCCCTCCGATCAGGGTCAGTCCGAGCCAATTCCCTAGCCCAACTGGGCTGCCTTCTCTAACCACAGCAGTGGCTAGTTGGCAGGTTGTTTGCAATATCACTCTGCCTAAGTCAGCGAGCCCAAAATGCTGTGTTTCGTTCTCTGCCTATTACAACGAGTCAGTGATCCCTTGCCGGACTTGTGCATGTGGGTGTCCGAGCAACACGAGCCGGACGTGCAGCTCGACTACGCCAGCAATGCTTCTTCCGGCCGAGGCTCTTCTCGTCCCCTTCGACAATCGTACCGAGAAAGCATTGGCCTGGGCTGCACTGAAGCACTTTCCGGTTCCAAATCCGACGCCTTGTGGCGATAATTGCGGAGTGAGTATAAATTGGCACGTTTATACGGATTATTCGAGCGGATGGAGTGCTAGAATTACCCTTTTCAATTGGGACGACTTCGATTTTGCCGATTGGTTTGTCGCCGTGGAGATGAACAAAACAGCCCCAGGATTTCAAGCGATGTACTCCTTCAACGGGACAACATTGGAGCTAGATGGAACGAATAACACCGTTTTCATGCAGGGTCTTCCGGGATTGAACTATTTAGTGGGGGAGAGAGACGGCGATAACCCAGAGAAGGATCCGAGAGTGCCCGGAAAACAACAATCCGTGATTTCTTTTACGAAGAAAAACATTCAAGGAATCAATGTTGCGGCCGGAGATGGGTTTCCTTCAAAAGTCTTCTTCAATGGAGAGGAATGTTCGATTCCTCAATTGCTCCCAAGCAAGGCAAGTTTGAAGGGTCCAGCCTCATTTTTCTCTCTCCTCTCAATTCTTATGATCATGTTTCTTCTATGA 1536 47.66 MQVQVNLVGTQFGVASPEIPMPLNISLVNDGYACGHSTLQGTREMHVCCTPDTNVKTNISISDEFLPRQDGDLIIMYDVTRTYDSSYWTQVTISNHNPLGRLDSWKLSWDWMMGEFIYSMKGAYPSVVDSSECIFGPQGNHYQGMDFSEVLNCERRPTIVDLPLSKANDTNLGHVPYCCRNGTILPPHMDPSKSISSFQMQVFKMPPELNRSQLTPPQNWKINGSLNPSYLCGPPIRVSPSQFPSPTGLPSLTTAVASWQVVCNITLPKSASPKCCVSFSAYYNESVIPCRTCACGCPSNTSRTCSSTTPAMLLPAEALLVPFDNRTEKALAWAALKHFPVPNPTPCGDNCGVSINWHVYTDYSSGWSARITLFNWDDFDFADWFVAVEMNKTAPGFQAMYSFNGTTLELDGTNNTVFMQGLPGLNYLVGERDGDNPEKDPRVPGKQQSVISFTKKNIQGINVAAGDGFPSKVFFNGEECSIPQLLPSKASLKGPASFFSLLSILMIMFLL 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48729417 48731194 + Bma022177.1 Bma05g01021 83105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01021 511 PANTHER COBRA-LIKE PROTEIN 7 1 509 - -
Bma05g01021 511 Pfam COBRA-like protein 87 266 IPR006918 GO:0010215|GO:0031225
Bma05g01021 511 PANTHER COBRA-LIKE PROTEIN 7 1 509 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01143 Bma05g01021 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01021 Bma-Chr5:48729417 Bma13g01035 Bma-Chr13:42938329 0 dispersed
Bma04g01143 Bma-Chr4:28850026 Bma05g01021 Bma-Chr5:48729417 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01021 - - mcha:111009498 823.928