Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01024 ATGCCTTGGCATGATGTGCATTGTGCCCTATGGGGACCACCATGCCGTGATGTAGCTAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCCAATGAGCAAGCAATTCCACTACTTATGCCTCAGCACCACATGGTTATTCCACATTACTTGGGACAGAGTAGAGAGTTGGAAGATGAACAGGAGAATTTAAACGCGTCGAAAGACAATAAAAAATTGGATTCTTTTTCGTCTCGTTCCTCATTTCAAGATATTCCACTGCTTTTGCCGCAAGAGGCTGATGGACTAGGTTCTGAAATTAAAGACTCAAAGTCTACAGGGGAAGATTCTGCTTCTAATTTTCATAGTCAGGCCAACAAGGCTAATGGTAGTCTTCCTTTTTCTTTCCGGAAGTCTAAAGGTGATCAACTTGGTACGGCTTTGCCAATGAAAGGCTTTGTTGATGATTTTGACACTTCAGATTGTCATGGGAAAACGTTGGGAGAGGGAGTAACACAAAATGGCATAAGAAATTCAAATCCGGAGTGGTGGGAAACACAAGAGAGGGGAGATCAAGGTGGTTTGATGAATGAATGTGGACAAGTTGGTCCTCGTTCCTCGTGTCGCTGTCAGGTTATTAGAAGTGTCAGTCAATGGTCTGCTGGAACAAGCCAAACTGAAGAGAGCATTCACATTGCTTATTGTTCTCTTATAGAAAAAGCTGAACATTTTATTTATATCGAGAATCAATTTTTCATATCAGGTCTTTCAGGGGATGAGATAATCCGCAACCGTGTATTAGAAGCACTTTATCGTCGAATTATGAGAGCTTACAGTGATAAGAAGATTTTTAGGGTTATTATTATTATACCACTTTTACCAGGTTTCCAGGGGGGTCTGGATGATAGCGGTGCAGCATCAGTGAGAGCCATAATGCATTGGCAGTACCGAACAATATGTAGAGGAAATAGTTCGATACTGCATAATTTGTATGATCTTCTTGGTTCTAAAGCCCATGATTACATTTCATTCTATGGTGTCAGAGCCTATGGCAGACTTTATGATGGTGGTCCAGTGGCCTCAAGTCAGGTTTACGTTCATAGCAAAATCCTCATTGTTGACGATTCCACTGCATTGATTGGATCTGCTAACATTAATGATAGGAGTTTACTTGGTTCGAGGGATTCTGAGATTTGTATCGTCATCGAAGACAAAGAGCTAGTTACTTCTCAAATGGGAGGACAACCGTGGCAAGCTGGAAGATTTTGTTTGAGTCTTCGGCTGTCGCTATGGGCGGAGCACCTTGGTCTTCGTCCCGGACAGATTAATCAAATTGTGGACCCTATTGCTGATTCAACGTACAAGGACATTTGGATGGCAACTGCTAAGACAAATACCACAATCTACCAAGATGTGTTTTCTTGTATACCAAATGACCTTGTCCATTCCAGAGCGGCCCTACGACAAAGCATGGCATCTTGGAAAGAGAAACTGGATCACACTACGATAGACTTGGGAATTGCACCAGAGAAACTAGAGTACTTCCAGAATGGAGATATAAAGAAGATCGATCCAATTGAGAGACTGGAAACAGTGAAAGGGCATCTCGTTTCTTTCCCTTTGGAGTTCATGTGCCAAGAAGACCTGAGACCTGTTTTCAATGAGAGTGAGTATTATGCTTCCCAAGTCTTCCATTAA 1689 42.16 MPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGQSRELEDEQENLNASKDNKKLDSFSSRSSFQDIPLLLPQEADGLGSEIKDSKSTGEDSASNFHSQANKANGSLPFSFRKSKGDQLGTALPMKGFVDDFDTSDCHGKTLGEGVTQNGIRNSNPEWWETQERGDQGGLMNECGQVGPRSSCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLEALYRRIMRAYSDKKIFRVIIIIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGNSSILHNLYDLLGSKAHDYISFYGVRAYGRLYDGGPVASSQVYVHSKILIVDDSTALIGSANINDRSLLGSRDSEICIVIEDKELVTSQMGGQPWQAGRFCLSLRLSLWAEHLGLRPGQINQIVDPIADSTYKDIWMATAKTNTTIYQDVFSCIPNDLVHSRAALRQSMASWKEKLDHTTIDLGIAPEKLEYFQNGDIKKIDPIERLETVKGHLVSFPLEFMCQEDLRPVFNESEYYASQVFH 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 48786210 48791922 - Bma022182.1 Bma05g01024 83108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01024 562 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 359 386 IPR001736 GO:0003824
Bma05g01024 562 SUPERFAMILY Phospholipase D/nuclease 200 407 - -
Bma05g01024 562 PANTHER PHOSPHOLIPASE D 1 559 IPR015679 -
Bma05g01024 562 PANTHER PHOSPHOLIPASE 1 559 - -
Bma05g01024 562 SMART pld_4 359 386 IPR001736 GO:0003824
Bma05g01024 562 CDD PLDc_vPLD1_2_yPLD_like_2 219 403 - -
Bma05g01024 562 MobiDBLite consensus disorder prediction 63 79 - -
Bma05g01024 562 Gene3D Endonuclease Chain A 1 49 - -
Bma05g01024 562 MobiDBLite consensus disorder prediction 113 130 - -
Bma05g01024 562 Pfam PLD-like domain 233 406 IPR025202 -
Bma05g01024 562 MobiDBLite consensus disorder prediction 101 131 - -
Bma05g01024 562 PIRSF PLD_euk 1 73 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bma05g01024 562 PIRSF PLD_euk 53 562 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bma05g01024 562 MobiDBLite consensus disorder prediction 63 82 - -
Bma05g01024 562 Coils Coil 58 78 - -
Bma05g01024 562 Gene3D Endonuclease Chain A 183 415 - -
Bma05g01024 562 SUPERFAMILY Phospholipase D/nuclease 1 46 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01024 Bma-Chr5:48786210 Bma14g01317 Bma-Chr14:24301806 0 dispersed
Bma05g01024 Bma-Chr5:48786210 Bma09g00903 Bma-Chr9:48415787 2.87E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01024 K01115 - qsu:112006006 909.827