Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01064 CGGACGGCTTTGATGGTCGTCGAAGAAGGCGGGACAATAATGGGAATGGGGTACGAATTGAGCTCCGATCACCATTCCGTGGTTTCGATGAATCTATTCGTTGCTCTTCTTTGCGCCTGCATTGTTATCGGCCATTTTCTTGAAGAAAATCGTTGGTTCAATGAGTCTATTACGGCTCTCATTATTGGTTTATTCACTGGGGTGGTTATATTGCTTACGACCAGAGGAAAAAGCTCACGTTTGTTAGTGTTCAGTGAAGATCTCTTCTTCATCTATCTTCTTCCCCCTATAATATTCAATGCTGGGTTCCAGGTGAAGAAGAAGCAATTTTTCCGCAACTTTATGACTATCATGCTATTTGGAGCATTTGGCACTCTCATATCCTTTGGAATTATATCAACAGGTGCCTTCCATTTTTTTCGGAAAATAGGAATTAGTTCGCTTGAGATTACCGATTACCTAGCAGTTGGCGCCATATTTTCTGCAACCGATTCTGTTTGCACTCTGCAGGTTCTTAATCAGGATGAGACTCCCCTTTTGTACAGTTTGGTTTTTGGGGAAGGGGTTGTTAATGATGCTACATCTGTGGTGCTATTCAACGCGATTCAAAAGTTTGATCTCACTCACATCAATTCAAGCATAGTTTTGCAATTCATTGCCAACTTCTTGTATTTATTTATTGCAAGCACATTGTTGGGTTTCTTGGCTGGTCTGATTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGACATTCTACGGATCGTGAGGTGGCACTGATGATACTCATAGCATATCTCTCATATGTCTTGGCTGAGCTCTTTAACTTAAGCGCGATTCTTACAGTATTCTTTTGCGGTATTGTTATGTCACATTACACCTGGCATAATGTGACTGAAAGTTCAAGGGTGACCAGTAAGCATGCGTTTGCTACTCTGTCGTTGATAGCCGAGATTTTTATCTTCCTTTACGTTGGCATGGATGCCTTGGACATTGAAAAGTGGAGATATGTAAGCGATAGTCCTAGGAAATCCATTGGAGTGAGTTCTATATTGTTGGGACTTGTTCTGGTTGGAAGGGCAGCTTTTGTTTTTCCTCTTTCCCTCTTGTCCAATTTGACCAAGAAGTCGTCATATGAGAAGATTAATTTAAAGCAGCAATTCACAATTTGGTGGGCCGGTCTTATGCGTGGTGCAGTTTCTATGGCACTTTCATATAATCAGTTTAGCAGGTCAGGTCATACCCAATTACGTGGGAATGCATTCATGATTACTAGCACTATAACAGTTGTTCTTTTCAGCACCATGGCGTTTGGATTGATGACAAAAGCTTTAGTTAGAATCTTGCTGCCTCCTTCAAAACAAACAAGCAGTGTGTTTTCTGAACCATCTACTCCTAAATCCTTCACTCTCCCACTTCTTTGCAATGGGAACAGCTCGGGAAGTGGTGACAATTGCAGCCAAACTTGGAGCTTGTGGATGATTTTTAGCATTCCTACCCGATCGGTGCACCATTATTGGCGGAGTTTTGACGATGCTTTTATGCGTCCGGTTTTCGGAGGGAGAGGTTTCGTGCCCTTTATTCCTGGCTCGGCAACTGATGAAGGCGGCCGACAATGGCTGCATGAGGAAGTACAGATTGAAGGTAACAAA 1653 42.35 RTALMVVEEGGTIMGMGYELSSDHHSVVSMNLFVALLCACIVIGHFLEENRWFNESITALIIGLFTGVVILLTTRGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAFGTLISFGIISTGAFHFFRKIGISSLEITDYLAVGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLTHINSSIVLQFIANFLYLFIASTLLGFLAGLISAYIIKKLYFGRHSTDREVALMILIAYLSYVLAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTSKHAFATLSLIAEIFIFLYVGMDALDIEKWRYVSDSPRKSIGVSSILLGLVLVGRAAFVFPLSLLSNLTKKSSYEKINLKQQFTIWWAGLMRGAVSMALSYNQFSRSGHTQLRGNAFMITSTITVVLFSTMAFGLMTKALVRILLPPSKQTSSVFSEPSTPKSFTLPLLCNGNSSGSGDNCSQTWSLWMIFSIPTRSVHHYWRSFDDAFMRPVFGGRGFVPFIPGSATDEGGRQWLHEEVQIEGNK 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 49333712 49337421 - Bma031226 Bma05g01064 83148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01064 551 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma05g01064 551 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma05g01064 551 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma05g01064 551 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma05g01064 551 Gene3D - 149 201 - -
Bma05g01064 551 PANTHER SODIUM/HYDROGEN EXCHANGER 3 17 540 - -
Bma05g01064 551 PANTHER SODIUM/HYDROGEN EXCHANGER 17 540 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bma05g01064 551 Pfam Sodium/hydrogen exchanger family 34 447 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00565 Bma-Chr1:5067918 Bma05g01064 Bma-Chr5:49333712 0 dispersed
Bma01g00580 Bma-Chr1:5206617 Bma05g01064 Bma-Chr5:49333712 0 dispersed
Bma05g01064 Bma-Chr5:49333712 Bma09g00716 Bma-Chr9:45234376 0 dispersed
Bma05g01064 Bma-Chr5:49333712 Bma05g00316 Bma-Chr5:9974003 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01064 - - cmos:111436756 816.224