Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01065 ATGGATTCGGTGAGGTGCTGGTTCAATAAGTTTAAGTCCAAAGACAAGTCGAAGTCTCCAAAGAAGAAAGAGGCAACAAGTGGGAAGGAGCCAGTAAAAGCTCCAACTACTGAGGAAATACCTTCAAATGTAACCAAACAAAAGGTTGCAGCTGCAAAGCAGTATATTGAAAACCATTATAAGAAGCAAATGAAGAACTTGCAGGAAAGGAAGGATAGGCGTGATTTATTAGAAAAAAAATTGGCTGATGCTGAGGTTTCTGAAGACGAGCTAAACAACTTGCTTAAATACTTAGAGAAGAAGGAGACAGAATATATGCGCATTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCTTTGACTATGATAGGGAAGGGTGCGTTTGGAGAGGTTAGAGTCTGTAGAGAGAAAGCAACGGGTCATGTATATGCTATGAAGAAGCTTAAAAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACATGTGAAAGCAGAGAGGAATCTACTTGCAGAGGTTGATAGCAATTGTATTGTGAAGCTGTACTGTTCCTTCCAAGATGAGGAATATTTATATCTAGTTATGGAATACCTACCTGGGGGAGATATGATGACTTTACTTATGCGGAAGGATATACTTACAGAAGATGAGGCCAAGTTTTATGTTGGGGAAACTGTTCTGGCTATTGAATCCATTCATAAACATAATTATATTCACAGAGATATCAAGCCTGACAACTTACTACTAGATAGAACTGGTCATATGAAACTATCAGATTTTGGATTATGTAAACCATTGGACTGCACTAACCTCCAAGAAAAGGATTTTTCTATTGGAAACAACCTTAGTGGAGCCCTTCAAAGTGATGGGCGCCCTGCAATACCAAAACGGACACAGCAAGAACAACTGCAGCACTGGCAACGAAACAGGAGGATGCTAGCCTACTCGACTGTTGGAACTCCTGACTACATTGCCCCAGAAGTTTTGCTGAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCTCTTGGAGCTATAATGTATGAAATGCTTGTTGGGTACCCACCTTTTTATTCAGATGAACCCATGTCCACTTGTAGGAAGATAGTCAATTGGAGGACTCACTTAAAATTTCCAGAAGAAGCAAAACTCTCTCTGGAAGCTAAGGATCTAATAAGTAAACTCTTGTGCAATGTTGACCAGAGACTGGGAACAAAAGGGGCTGATGAAATAAAGTCTCATCCGTGGTTCAAGGGCATTGAATGGGATAAATTATATCAAATGAAAGCTGCATTTATTCCGGAAGTCAATGATGAACTGGATACTCAAAATTTTGAGAAATTTGAAGAGGTTGAAAACCAAATCCAGACATCATCAAAATCGGGTCCATGGAGAAAGATGCTCTCATCTAAGGATATTAACTTCGTGGGTTACACTTACAAGAACTTTGAAATTGTCAACGACCATCAGATACCTGGCATCGCTGAACTCAAGAAGAAGAGCCCAAAACCTAAGAGACCTTCCATCAAAAACCTCTTTGATGATGAATCGACCATGGGTGCGAATCACTCAGTCCAGGGAAGTTTTTTGAAGCTCTTGCCTCCCCAGTTGGTGGTCCCTGAGAAGCAAATAGATGGGGAGGAGAAGCATTAA 1653 40.71 MDSVRCWFNKFKSKDKSKSPKKKEATSGKEPVKAPTTEEIPSNVTKQKVAAAKQYIENHYKKQMKNLQERKDRRDLLEKKLADAEVSEDELNNLLKYLEKKETEYMRIQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLVMEYLPGGDMMTLLMRKDILTEDEAKFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRTGHMKLSDFGLCKPLDCTNLQEKDFSIGNNLSGALQSDGRPAIPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSLEAKDLISKLLCNVDQRLGTKGADEIKSHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVENQIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQIPGIAELKKKSPKPKRPSIKNLFDDESTMGANHSVQGSFLKLLPPQLVVPEKQIDGEEKH 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 49339079 49344054 - Bma022229.2 Bma05g01065 83149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01065 550 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Bma05g01065 550 Gene3D Transferase(Phosphotransferase) domain 1 204 434 - -
Bma05g01065 550 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Bma05g01065 550 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma05g01065 550 MobiDBLite consensus disorder prediction 12 47 - -
Bma05g01065 550 Pfam Protein kinase domain 120 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g01065 550 Coils Coil 60 104 - -
Bma05g01065 550 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma05g01065 550 SUPERFAMILY Protein kinase-like (PK-like) 94 470 IPR011009 -
Bma05g01065 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Bma05g01065 550 MobiDBLite consensus disorder prediction 498 512 - -
Bma05g01065 550 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 37 520 - -
Bma05g01065 550 CDD STKc_NDR_like 116 481 - -
Bma05g01065 550 Pfam Protein kinase C terminal domain 436 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bma05g01065 550 ProSiteProfiles Protein kinase domain profile. 118 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g01065 550 MobiDBLite consensus disorder prediction 498 520 - -
Bma05g01065 550 MobiDBLite consensus disorder prediction 12 29 - -
Bma05g01065 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 520 - -
Bma05g01065 550 SMART serkin_6 118 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00072 Bma-Chr5:2579265 Bma05g01065 Bma-Chr5:49339079 0 dispersed
Bma05g01065 Bma-Chr5:49339079 Bma15g00522 Bma-Chr15:6002312 0 dispersed
Bma11g00532 Bma-Chr11:6782208 Bma05g01065 Bma-Chr5:49339079 6.11E-36 dispersed
Bma05g01065 Bma-Chr5:49339079 Bma09g00765 Bma-Chr9:46175670 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66511 PF00069 Pkinase 5.90E-65 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01065 K08790 - qsu:112030601 979.548