Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g01075 | CTGGCTAATCCGTGGTGGGCCGGCCAAGTAGGGCTGCCGATAATCGACTCGACAGCCAATTCATCTCTTATGAAACTCCAACGCGACCGTGAAACCTCCATGAACGATCAAAACAGTAGAGAAGACGATGATGACGAGAGAGAAAACGGATCAGACGAGCCAAGAGAAGGAGCCGTCGAGATCGGAAATCGCAGACCGAGAGGCCGTCCACCCGGATCCAAAAACAAGCCGAAACCACCGATTTTCGTGACCCAAGACAGCCCAAACGCCCTCCGGAGCCACGTTATGGAGGTCGCCGGAGGAGCTGATGTGGCGGAGAGCGTAGCTCAGTTCGCTAGGCGTAGGCAGCGGGGTGTGTGCGTGCTGAGTGCTAGCGGCGCAGTCACGAACGTCACCATACGCCAGCCTGCAACACCTGGTGCTGTGGTGGCACTACATGGACGGTTCGAGATTTTGTCACTGACCGGAGCTTTTTTGCCAGGTCCGGCCCCACCCGGGTCTACGGGTATGACCGTTTATCTCGCCGGAGGGCAAGGACAGGTCGTCGGAGGGAGTGTAGTTGGGTCTCTAGTTGCAGCTGGGCCAGTAATGGTGATTGCCGCAACTTTTTCCAATGCGACTTACGAGAGATTGCCTCTTGAAGACGACGACGGTAATGAAGGCGGAATCGGCAGTACAGGAGCTGGAACCTCCCCTCCGTCGATGGGAGGCAGCGGAGGGAATTTCCCGGGGGGTTTGCCGGATTCTTCTTCTGCCCTTCCCGTTTACAATTTGACTCCAAATCTTATTCCCAATGGAGGTCAACTCGGACATGAAGCTGCTTATGCTACTTGGGCCGGCCATGGGAGACCAAACTACTGA | 861 | 56.21 | LANPWWAGQVGLPIIDSTANSSLMKLQRDRETSMNDQNSREDDDDERENGSDEPREGAVEIGNRRPRGRPPGSKNKPKPPIFVTQDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSASGAVTNVTIRQPATPGAVVALHGRFEILSLTGAFLPGPAPPGSTGMTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFSNATYERLPLEDDDGNEGGIGSTGAGTSPPSMGGSGGNFPGGLPDSSSALPVYNLTPNLIPNGGQLGHEAAYATWAGHGRPNY | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 49485995 | 49486855 | + | Bma022242.1 | Bma05g01075 | 83159 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g01075 | 286 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 89 | 217 | - | - | |
Bma05g01075 | 286 | PIRSF | ESCAROLA | 10 | 286 | IPR014476 | GO:0003680 | |
Bma05g01075 | 286 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 | 7 | 286 | - | - | |
Bma05g01075 | 286 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 92 | 205 | IPR005175 | - | |
Bma05g01075 | 286 | Gene3D | - | 91 | 220 | - | - | |
Bma05g01075 | 286 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 7 | 286 | IPR014476 | GO:0003680 | |
Bma05g01075 | 286 | MobiDBLite | consensus disorder prediction | 16 | 88 | - | - | |
Bma05g01075 | 286 | MobiDBLite | consensus disorder prediction | 211 | 246 | - | - | |
Bma05g01075 | 286 | CDD | DUF296 | 92 | 175 | IPR005175 | - | |
Bma05g01075 | 286 | ProSiteProfiles | PPC domain profile profile. | 88 | 224 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01165 | Bma-Chr2:53776721 | Bma05g01075 | Bma-Chr5:49485995 | 1.44E-71 | dispersed | |
Bma05g01075 | Bma-Chr5:49485995 | Bma08g01008 | Bma-Chr8:49104811 | 7.75E-77 | dispersed | |
Bma02g00799 | Bma-Chr2:42840999 | Bma05g01075 | Bma-Chr5:49485995 | 4.33E-81 | wgd | |
Bma04g00746 | Bma-Chr4:8030831 | Bma05g01075 | Bma-Chr5:49485995 | 1.48E-143 | wgd | |
Bma05g01075 | Bma-Chr5:49485995 | Bma06g01590 | Bma-Chr6:52144263 | 4.71E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g01075 | - | - | qsu:111993894 | 345.51 |