Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01081 ATGGAACCAAGGATAGTCCGAGAAATCGACGCTATGAGACGCCTTCATCACCACCCTAACATTCTCAAGATCCATGAGGTCATGGCTACCAAATCGAAGATTTACCTCGTCGTCGAGTTTGCTTCAGGCGGCGAGCTTTTTGCCAAGATATCTCGCCGCGGTCGGCTCTCGGAGTCCGCCGCTCGCCGGTACTTTCAGCAGCTCGTATCTGCTCTTGATTTCTGTCACAAGAATGGCGTCGCTCATCGAGACGTGAAGCCTCAGAATCTCCTCCTCGATAAAGACGGTACTTTGAAAGTCTCTGATTTTGGCCTCTCAGCGTTACCGGAGCAGCTTCAGAACGGCTTGCTCCATACCGCCTGCGGGACTCCAGCATATACCGCGCCGGAAGTTGTCTCCCGGCGAGGCTATGACGGTTCAAAAGCTGATGCTTGGTCCTGCGGTGTCATCCTCTTCGTCTTTCTTTCCGGTCGCCTTCCGTTCGATGATAGCAATATTGCAACAATGTACAACAAAATTTACCGGCGAGATTATCAATTTCCGGACTGGATCTCAAAGCCGGCAAAGCACCTAATATTTCAGCTCCTCGATCCGAATCCAAAATCCAGGATGAGCATAGAAGCTCTCATGCGAAACTCCTGGTTCAAAAAATCCATCCAATCGAAGCTTCATAAAGACTGCGAAGAAGACAATTCTCTCACCGAATCGTTTCTGAATTGTAAACTGGAAAACAACGTTCCAGTGATGAACGCATTCGACATAATTTCCATGTCTTCAGGGCTGAATCTGTCAGGGCTATTCGAAGTGGCGACAAAGAAGAACGAGAAGAGATTCACGACAAAATTCACGGCGGACGAGCTGGAGGAGAAAGTGAAGGTGATTGGAGGCGAAATGGGATTCCACGTGAAAAGACTGGGGAAAAACCGGTCGATCAGGATGGGTAAGGGGAGGGTGGTTTTGACGGTGGAGGTCTCGGAAATGGCCCCGAGCCTGTTGATGGTGGAGATGAAGGTGGTGGAAGCAGTGGTAGAGTTTGAGGAGCTTCAATGGAGGGATTTGAAAACCAAGCTTCAAGACATTGTAGTTTCATGGCACTGCAACAACAACGACCAAGAAGAAGACTCCTAG 1128 49.38 MEPRIVREIDAMRRLHHHPNILKIHEVMATKSKIYLVVEFASGGELFAKISRRGRLSESAARRYFQQLVSALDFCHKNGVAHRDVKPQNLLLDKDGTLKVSDFGLSALPEQLQNGLLHTACGTPAYTAPEVVSRRGYDGSKADAWSCGVILFVFLSGRLPFDDSNIATMYNKIYRRDYQFPDWISKPAKHLIFQLLDPNPKSRMSIEALMRNSWFKKSIQSKLHKDCEEDNSLTESFLNCKLENNVPVMNAFDIISMSSGLNLSGLFEVATKKNEKRFTTKFTADELEEKVKVIGGEMGFHVKRLGKNRSIRMGKGRVVLTVEVSEMAPSLLMVEMKVVEAVVEFEELQWRDLKTKLQDIVVSWHCNNNDQEEDS 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 49564266 49565393 - Bma022249.1 Bma05g01081 83165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01081 375 Gene3D Transferase(Phosphotransferase) domain 1 46 240 - -
Bma05g01081 375 SUPERFAMILY Protein kinase-like (PK-like) 3 230 IPR011009 -
Bma05g01081 375 CDD CIPK_C 250 337 - -
Bma05g01081 375 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 367 - -
Bma05g01081 375 ProSiteProfiles NAF domain profile. 244 268 IPR018451 GO:0007165
Bma05g01081 375 Pfam NAF domain 248 303 IPR004041 GO:0007165
Bma05g01081 375 Pfam Protein kinase domain 4 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g01081 375 Gene3D Phosphorylase Kinase; domain 1 1 45 - -
Bma05g01081 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Bma05g01081 375 SMART serkin_6 3 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma05g01081 375 PANTHER SERINE/THREONINE KINASE 1 367 - -
Bma05g01081 375 Gene3D Kinase associated domain 1, KA1 245 363 - -
Bma05g01081 375 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g00755 Bma05g01081 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01081 Bma-Chr5:49564266 Bma07g00769 Bma-Chr7:22264983 1.89E-117 dispersed
Bma04g00755 Bma-Chr4:8119226 Bma05g01081 Bma-Chr5:49564266 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66512 PF00069 Pkinase 7.20E-61 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01081 K12761 - csv:101215156 498.049