Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g01092 | ATGAATGTCAGTCCAGCGACGCTCCGATCGATTCTGGACAAACCGCTTAACCAGCTCACTGAGGATGACATTTCGCAGCTCACCCGGGAGGACTGCCGGAAATATCTCAAAGAAAAAGGAATGCGGAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAGGTTATTTGCCTAAAAGCTTTGCTTGAGCCCTGCGATGATTCCGGAGCCGTAGCGCTCCGAAAGCTTGCTGTTTCTACTCGTGTGACTTTGAGTCCTGGAGATTCTGCTAAAGAACCAAGCGATGATACGCAGCCTCCATTGTCAACTGATGAAGCTGTTCCAACTAGGCAAGCTGAGCCTTCGGATTCTTTTCAAGAGGATTCACATGCTGATTCAGAGTACAAGGTCACCAGTCTGAGAAGCAAGGGCACTATAAATGGTTCAGTTGGGCAAATGGCAATTTTTTACAGTGGCAAGGTGAACGTGTATGATGAAATGCCTCGTGATAAAGCACGGGCAATCATGCATGTTGCAGCTCATCCAATTCATTTTAGAGGAGATCATTTATTTGGTGGATTTCCTCTTCGATCTCACTCTCCATGCCATTTGCAGATGGCAAATGAAAAAGAGGGCCCTTTTCCTCTTAAACCCACTCTCCACCATGCAACACAGTCAGGTATTGTTTGA | 669 | 47.23 | MNVSPATLRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGAVALRKLAVSTRVTLSPGDSAKEPSDDTQPPLSTDEAVPTRQAEPSDSFQEDSHADSEYKVTSLRSKGTINGSVGQMAIFYSGKVNVYDEMPRDKARAIMHVAAHPIHFRGDHLFGGFPLRSHSPCHLQMANEKEGPFPLKPTLHHATQSGIV | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 49647358 | 49649438 | - | Bma022260.1 | Bma05g01092 | 83176 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g01092 | 222 | SMART | tify_2 | 139 | 174 | IPR010399 | - | |
Bma05g01092 | 222 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 6 | 207 | IPR040390 | - | |
Bma05g01092 | 222 | MobiDBLite | consensus disorder prediction | 82 | 115 | - | - | |
Bma05g01092 | 222 | MobiDBLite | consensus disorder prediction | 82 | 127 | - | - | |
Bma05g01092 | 222 | ProSiteProfiles | Tify domain profile. | 139 | 174 | IPR010399 | - | |
Bma05g01092 | 222 | Pfam | tify domain | 145 | 173 | IPR010399 | - | |
Bma05g01092 | 222 | PANTHER | PROTEIN TIFY 4B-LIKE ISOFORM X1 | 6 | 207 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma05g01092 | Bma06g01570 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g01092 | Bma-Chr5:49647358 | Bma06g01570 | Bma-Chr6:51983574 | 1.28E-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57366 | PF06200 | tify | 1.10E-11 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g01092 | - | - | csv:101204377 | 244.202 |