Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01092 ATGAATGTCAGTCCAGCGACGCTCCGATCGATTCTGGACAAACCGCTTAACCAGCTCACTGAGGATGACATTTCGCAGCTCACCCGGGAGGACTGCCGGAAATATCTCAAAGAAAAAGGAATGCGGAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAGGTTATTTGCCTAAAAGCTTTGCTTGAGCCCTGCGATGATTCCGGAGCCGTAGCGCTCCGAAAGCTTGCTGTTTCTACTCGTGTGACTTTGAGTCCTGGAGATTCTGCTAAAGAACCAAGCGATGATACGCAGCCTCCATTGTCAACTGATGAAGCTGTTCCAACTAGGCAAGCTGAGCCTTCGGATTCTTTTCAAGAGGATTCACATGCTGATTCAGAGTACAAGGTCACCAGTCTGAGAAGCAAGGGCACTATAAATGGTTCAGTTGGGCAAATGGCAATTTTTTACAGTGGCAAGGTGAACGTGTATGATGAAATGCCTCGTGATAAAGCACGGGCAATCATGCATGTTGCAGCTCATCCAATTCATTTTAGAGGAGATCATTTATTTGGTGGATTTCCTCTTCGATCTCACTCTCCATGCCATTTGCAGATGGCAAATGAAAAAGAGGGCCCTTTTCCTCTTAAACCCACTCTCCACCATGCAACACAGTCAGGTATTGTTTGA 669 47.23 MNVSPATLRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGAVALRKLAVSTRVTLSPGDSAKEPSDDTQPPLSTDEAVPTRQAEPSDSFQEDSHADSEYKVTSLRSKGTINGSVGQMAIFYSGKVNVYDEMPRDKARAIMHVAAHPIHFRGDHLFGGFPLRSHSPCHLQMANEKEGPFPLKPTLHHATQSGIV 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 49647358 49649438 - Bma022260.1 Bma05g01092 83176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01092 222 SMART tify_2 139 174 IPR010399 -
Bma05g01092 222 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 207 IPR040390 -
Bma05g01092 222 MobiDBLite consensus disorder prediction 82 115 - -
Bma05g01092 222 MobiDBLite consensus disorder prediction 82 127 - -
Bma05g01092 222 ProSiteProfiles Tify domain profile. 139 174 IPR010399 -
Bma05g01092 222 Pfam tify domain 145 173 IPR010399 -
Bma05g01092 222 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 6 207 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g01092 Bma06g01570 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01092 Bma-Chr5:49647358 Bma06g01570 Bma-Chr6:51983574 1.28E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57366 PF06200 tify 1.10E-11 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01092 - - csv:101204377 244.202