Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01121 ATGAATAATTATGGTTCTTCACCTTCATATCCATACCATAATCCATATGCATATCCCCATCCACCTCCTCCTCAACAACCACCTCATCCGCCGGATCCATACGCTGCTCCTCCTTACCCCAATCAATTGAATTCTCTTTATTCTTTTTCACATCCATACCCTCCTCATCCAACTTCCCCTTCCCGTGTCCAATCTGGTCCATTAGACTATCACCATCCACCTTCGCATTTGGGTTCTATCCCATATCCATATTCGTATCCAGTTCCTCCAGTTACTCCTAATGCTCCTCCTCTTCCTGTTCTTGAACCTCATGGAAGCTTCCAATATGGTACCTCTCATTCCCATTATCCACAACCAAGTCCTTACCCTCCTCCAGATGCTCAACCCCAATCCCCTCCCCATGCGGGATTCCCCAATCATCACCGGCAGGATTCATACCCGCCATTGGATGAACGTTTCGGGGGCATGCACTTGTCTGATTATCATCCATCTGCCCCTGAGTTGCCACCTGCACCTGCAGTGCATCCTCTGGTAAGCTCACCTTCGAGTGCGAGATATGAGAGGCAGGAAGGATTTTATGGATATCCAAATACTTCATTTTCTAGCAGCGAAGCAAGTTATTCTGGGCCTCTGGATTCGCCTGGTTATTCATTTTCCCACTCGAGTTCATTCAATGGGTCACAACATAGTCAGAATCTGCAGATTGTACCATTCCAAAAAGGATCCTTGAAAGTTCTCCTTCTGCATGGGAATTTAGAAATATGGGTAAATGGTGCACAAAACTTACCCAACATGGATATGTTTCACAAAACATTGGGAGACGTGTTCTCCAAATTACCAGGGAATGTAAGTAACAAAATTGAAGGCCACATGAGCCATAAGATCACTAGTGATCCCTATGTATCAATCTCTATTTCAAACGCTGTGATTGGAAGGACTTTTGTGATCAGCAACAGCGAAAATCCTTTATGGAAGCAACATTTCTTTGTTCCTGTCGCTCATTACGCTGCTGAAGTTCACTTTGTGGTCAAAGACAGTGATATCGTTGGATCACAGCTTATAGGCATCGTGGCGATTCCAGTCGAACAGTTATACTCAGGGGCAAAAATTGAGGGAACCTTCCCCATATTGAATAGTAGCGGAAAGCCATGTAAACCAGGTGCGGTTCTTAACGTTTCAATCAAGTATATCCCCATAGAGAAAATGACCATTTATCATCACGGAGTCGGGGCTGGCCCTCACTACCAGGGAGTTTCAGACACATATTTCCCTCTTAGAAAGGGTGGTAAGGTCACTCTTTATCAAGATGCGCATGTTCCTGACGGGAGCCTTCCAAACATTAGGCTTGGAAACAGAATGCATTATGTGCATGGGAAGTGTTGGCATGACATCTGCAATGCAATACGTCATGCCAAGCGTTTGGTTTACATCACTGGGTGGTCGATTTGGCACAAAGTCACATTAATTCGAGATGCTGGCTCTTCATCAAATCATAGCCTAGGAGATCTTTTGAGGTCAAAGTCGCAGGAAGGCGTGAGAGTGTTGCTTCTTATTTGGGACGACCCTACTTCTAGGAATATTTTGGGTTATAAAACAGATGGTGTTATGGCAACTCACGATGAGGAGACTCGTCGTTTTTTCAAACATTCTTCAGTGCAAGTGCTGCTTTGTCCACGCACCGCTGGAAAACGACATAGTTGGGTCAAGCAAAGGGAAGTTGAAACCATTTACACTCACCATCAGAAAACTGTGATCGTGGATGCTGATGCTGGCAATAATAGAAGAAAGATTGTTGCTTTTGTTGGTGGACTTGATCTATGCGATGGTCGATATGATAATCCACAACATTCTCTATTTAGAACACTAAAATCAGTGCATAAAGATGACTATCATAATCCTACTTATACGGGTAGTGTTGTTGGCTGTCCCAGAGAACCATGGCATGATTTGCACAGTAAAATTGATGGTCCAGCTGCATATGATGTTCTGACTAACTTTGAGGAGCGCTGGCGGCGGGCATCAATACCCAGTGGGATAAAGAAACTGAAATCCTCATCTGATGATGCTTTACTGATAATTGAAAGAATTTCCGATATAGTTGGGATATCTGATGTTTGTCGCAATAGTGAGGATGATCCTGAAGCTTGGCATGTTCAGATTTTCCGCTCTATAGATTCTAATTCTGTCAAAGGTTTTCCGAAGGAATCAGTAGATGCCTCAAGCAAGAATCTAGTGTGCGGTAAGAATGTTTTGATTGACATGAGCATACACACTGCATATGTCAAAGCAATTCGTGCTGCCCAGCATTACATTTACATAGAAAACCAGTACTTCATCGGATCATCATTCAATTGGAGTTCAAACAAAGATATAGGTGCTAACAATTTGATACCGATGGAAATAGCCCTAAAGATTGCTGATAAGATCAGAGCAAATGAGAGATTTGCTGTTTATATTGTCATCCCTATGTGGCCAGAAGGTGTTCCGACCGCTGCTGCTACACAGAGGATTCTATTTTGGCAGAACAAAACAATGCAGATGATGTATGAGACGATTTACAAGGCATTGGTGGAGGCTGGGCTAGAGGGTGCATTTTCACCACAAGACTACTTAAACTTCTTTTGTTTGGGGAATCGTGAAGCCGCTGATGGGAATGATCCTTTAACTGCAGAAAGCCCCACAGCAGAAAACACCCCTCAGGCGCTAAGCAGAAAAAGTCGCCGGTTTATGATATATGTTCATTCCAAAGGTATGATAGTTGATGATGAATATGTAATTTTGGGATCTGCAAATATCAACCAGCGATCTATGGAAGGCACTAGAGACACAGAAATTGCAATGGGAGCCTATCAACCAAGTCATACCTGGGCAAGAAAACACTCAAATCCTCAAGGACAGATTCACGGGTACCGAATGTCGTTATGGGCGGAGCACACGGGGGTCGTAGAAGAATGCTTCACACAACCAGAGAGTTTAGAATGTGTGAAAAGATTGAGAACAATTGGAGAGACGAACTGGAGGCAATTTGCAGCTGATGAGGTGACAGAGATAAGAGGGCACCTCCTAAAATACCCAGTTGAAGTTGATAGGAAAGGCAAAGTGAGGTCTCTACCTGGATGTGAACATTTTCCAGATGCTGGTGGGAAAATAGTGGGCTCATTTCTTGCCATCCAAGAGAATCTCACCATCTGA 3192 43.7 MNNYGSSPSYPYHNPYAYPHPPPPQQPPHPPDPYAAPPYPNQLNSLYSFSHPYPPHPTSPSRVQSGPLDYHHPPSHLGSIPYPYSYPVPPVTPNAPPLPVLEPHGSFQYGTSHSHYPQPSPYPPPDAQPQSPPHAGFPNHHRQDSYPPLDERFGGMHLSDYHPSAPELPPAPAVHPLVSSPSSARYERQEGFYGYPNTSFSSSEASYSGPLDSPGYSFSHSSSFNGSQHSQNLQIVPFQKGSLKVLLLHGNLEIWVNGAQNLPNMDMFHKTLGDVFSKLPGNVSNKIEGHMSHKITSDPYVSISISNAVIGRTFVISNSENPLWKQHFFVPVAHYAAEVHFVVKDSDIVGSQLIGIVAIPVEQLYSGAKIEGTFPILNSSGKPCKPGAVLNVSIKYIPIEKMTIYHHGVGAGPHYQGVSDTYFPLRKGGKVTLYQDAHVPDGSLPNIRLGNRMHYVHGKCWHDICNAIRHAKRLVYITGWSIWHKVTLIRDAGSSSNHSLGDLLRSKSQEGVRVLLLIWDDPTSRNILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRTAGKRHSWVKQREVETIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDNPQHSLFRTLKSVHKDDYHNPTYTGSVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASIPSGIKKLKSSSDDALLIIERISDIVGISDVCRNSEDDPEAWHVQIFRSIDSNSVKGFPKESVDASSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWSSNKDIGANNLIPMEIALKIADKIRANERFAVYIVIPMWPEGVPTAAATQRILFWQNKTMQMMYETIYKALVEAGLEGAFSPQDYLNFFCLGNREAADGNDPLTAESPTAENTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPSHTWARKHSNPQGQIHGYRMSLWAEHTGVVEECFTQPESLECVKRLRTIGETNWRQFAADEVTEIRGHLLKYPVEVDRKGKVRSLPGCEHFPDAGGKIVGSFLAIQENLTI 1063
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 50033692 50043157 + Bma022299.1 Bma05g01121 83205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01121 1063 MobiDBLite consensus disorder prediction 97 170 - -
Bma05g01121 1063 SMART C2_3c 251 373 IPR000008 -
Bma05g01121 1063 Gene3D Endonuclease Chain A 452 689 - -
Bma05g01121 1063 MobiDBLite consensus disorder prediction 1 74 - -
Bma05g01121 1063 Pfam PLD-like domain 761 945 IPR025202 -
Bma05g01121 1063 Gene3D Endonuclease Chain A 721 961 - -
Bma05g01121 1063 MobiDBLite consensus disorder prediction 117 132 - -
Bma05g01121 1063 SUPERFAMILY Phospholipase D/nuclease 415 673 - -
Bma05g01121 1063 SUPERFAMILY Phospholipase D/nuclease 713 995 - -
Bma05g01121 1063 SMART pld_4 575 610 IPR001736 GO:0003824
Bma05g01121 1063 SMART pld_4 909 936 IPR001736 GO:0003824
Bma05g01121 1063 Gene3D C2 domain 245 386 IPR035892 -
Bma05g01121 1063 CDD C2_plant_PLD 244 397 - -
Bma05g01121 1063 PANTHER PHOSPHOLIPASE D ALPHA 1 159 1063 - -
Bma05g01121 1063 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 575 610 IPR001736 GO:0003824
Bma05g01121 1063 PANTHER PHOSPHOLIPASE D 159 1063 IPR015679 -
Bma05g01121 1063 ProSiteProfiles C2 domain profile. 229 374 IPR000008 -
Bma05g01121 1063 Pfam Phospholipase D Active site motif 576 610 IPR001736 GO:0003824
Bma05g01121 1063 Pfam C2 domain 250 376 IPR000008 -
Bma05g01121 1063 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 243 400 IPR035892 -
Bma05g01121 1063 MobiDBLite consensus disorder prediction 14 38 - -
Bma05g01121 1063 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 909 936 IPR001736 GO:0003824
Bma05g01121 1063 Pfam Phospholipase D C terminal 983 1053 IPR024632 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00190 Bma-Chr5:5241623 Bma05g01121 Bma-Chr5:50033692 0 dispersed
Bma05g01121 Bma-Chr5:50033692 Bma12g00109 Bma-Chr12:1720156 0 dispersed
Bma05g01121 Bma-Chr5:50033692 Bma09g00903 Bma-Chr9:48415787 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01121 K01115 - jre:109011028 1580.46