Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01138 ATGGAAATTGTTCGTTCTCAGAGGAGATCCTCCCCTAGCGATGCCGTCAATACTCTCCCTCTCTACCGCTCTGCTCCTAGTCTCGAAGTCAGACTCGAAGATTTCGAGCTCTTTGCAATGGATCGCTTACGAGTTCTGAAAGGAATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAATTGGTAAACGATTTATGGAAAGCCAACATGAAACATCCTCAGACATCTGAAGTTGTCAACAAGGATATAATATCTCATTTTGTCCTTCGACTTGTCTATTGTAGAACGGATGAGTTGAGAAAATGGTTCCTTTCAATGGAAACTGCACTATTCCGCTATCGCTTTCGGCTCGAAAGTGCTGAAGCTCAGAGGATTCTCTTTGCAGAATTCGACCTTCCTTACAAGGCAGTTAGCAATGCAGAGTTTAAGGTTATAACAGAAAAATTGAGCCAAGTTGCTCGTTCAATGAATCAACGTTTGCCCGCTGGTACATTTCAACTTTGTGACTTTGTACCATTTGAAGAAGTTCCAGAACTTGTGGCTGCACGCAGAGTATTTATTCAGAAAGGATATGCATTTATTGCTTTAAATCAGGTTGTTTCCTTGGTTGTGACACAATTCCGTTCTTATCTGTCAAGGGCACTGATTTTGACAAACAGAAAATGGATATCTACCATAAGAGAGCAAGAAAAAGATCGTTTGACTCCTATTGTGGAAGCCCTTTGCTCGAGCTACTTAGGTCCTGACTACTCTCAGCCAAGAGAGTTTTCTGAGATATCAATAAAAGACTTGGACCAAATTGCAAGGAGTTCATTTCCTCTCTGTATGAGCCACCTATTTGAAAAGTTGAGGGAGGATCATCATTTAAAGCATGGTGGGAGAATGCAGTTAGGTCTTTTTCTTAAGGGCGTTGGTTTGAAGCTTGATGATGCACTCGCTTTCTGGAAAGCTGAGTTCTCCCAAAGGGTTGGAGTTGAGAGGTTTGATAAAGAATATGCATACACCATAAGACATAATTATGGAAAGGAAGGCAAGAGGACGGATTATACACCATATGCTTGCCAAAAGATCATATCATCAACTCCTGGAGTAGGAAATCACCATGGATGCCCCTACAGACATTTCAGTGAAGATAATTTAAGAGCAGCACTTGGTAAAATGGGAGTAAATAACCGGGCAGTAGATGATATTGTAGATAAAGCCCGAAACAAGCATTATCAGTTGGCATGCACCTTGACTTTTGAAGCCATACATGGCATCTCGTGTGATGAGGGGATTAACCATCCAAACCAATACTTTACTGACAGCCGCAAGATAATCAAATCTGAGGTTTTGCTTACATTACATTTAATTGGATCTTTTGGAATACTTTTTGACATTACTATTTAA 1401 40.47 MEIVRSQRRSSPSDAVNTLPLYRSAPSLEVRLEDFELFAMDRLRVLKGISDGLSRGKKSEEMEKLVNDLWKANMKHPQTSEVVNKDIISHFVLRLVYCRTDELRKWFLSMETALFRYRFRLESAEAQRILFAEFDLPYKAVSNAEFKVITEKLSQVARSMNQRLPAGTFQLCDFVPFEEVPELVAARRVFIQKGYAFIALNQVVSLVVTQFRSYLSRALILTNRKWISTIREQEKDRLTPIVEALCSSYLGPDYSQPREFSEISIKDLDQIARSSFPLCMSHLFEKLREDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGVERFDKEYAYTIRHNYGKEGKRTDYTPYACQKIISSTPGVGNHHGCPYRHFSEDNLRAALGKMGVNNRAVDDIVDKARNKHYQLACTLTFEAIHGISCDEGINHPNQYFTDSRKIIKSEVLLTLHLIGSFGILFDITI 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 50433532 50439664 - Bma022326.1 Bma05g01138 83222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01138 466 CDD PriL_PriS_Eukaryotic 21 440 IPR016558 -
Bma05g01138 466 PIRSF DNA_primase_large 3 449 IPR016558 -
Bma05g01138 466 PANTHER DNA PRIMASE LARGE SUBUNIT 1 448 - -
Bma05g01138 466 PANTHER DNA PRIMASE LARGE SUBUNIT 1 448 IPR007238 GO:0006269
Bma05g01138 466 Pfam Eukaryotic and archaeal DNA primase, large subunit 175 437 IPR007238 GO:0006269
Bma05g01138 466 Gene3D - 2 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01138 K02685 - vvi:100244238 749.969