Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01202 ATGGAAATGAAGCCGGAGAAGAGCAAGGAGGAAGTGGAGGACGACGGTTGCCTTACGGAGGTTGTCAGGTGGGAGAGGTTTCTTCCCAGGATGGCGCTGAGAGTTCTTCTTGTTGAAGCTGATGATTCCACGCGTCGGATAATTTCAGCGCTTCTCCGTAAATGCAGCTATAGAGTTACTGCTGTTTCTGATGGACTACAGGCGTGGGAAACTATAAGGGTTAAACCTCAGAGTATAGATATAATAATGACGGAGGTGGATTTGCCATCAATATCCGGATATGCTCTCCTTACTCTAGTGATGGAACATGAAGTTTGCAAAAACATTCCGGTTATAATGATGTCCTCTCAAGATTCAGTTAGCACGGTCTTCAAGTACATGTTGAGAGGCGCTGTTGACTTTCTTGTTAAACCTCTTAGGAGCAATGAGCTGAGGAACCTATGGCAGCATGTTTGGAGGAGGCAGAGTCATGGTGCCGATACTCCCTGTAAAGCTGTGGCATCTCTCGAGAATAATGCAGTGAGCAATTATTCAAGCGATATTGCATCATCCAGACAGAAACAGAAGGAATGCAGTGAGAAGGAGGGCGATACTCAAAGTTCATGTACAATGCCTCATGTGGAAGCTGAGAGTGCATACACTCCAAACATGCGGGGCCTTGCCAATTTAAAGAGTGGAAGTTCCTCTATTTTGAGCAACACTGGAGAGCCAGAGCATGATCATAGTGGCGTTATGGAAGGCAGAACTGGAGAAAATTTACACGCAATAGGATCAGAATTTCGATCCTGTCATGAAGTCTATTTTGCTACTCCTTTGAGACGGAAAGAAAACGTGGATTCCATCCAAGGAATTAATAGAGAAGGCCGTGCAGGATCTGATATGCATACAGATATGGAAATTCTCGCTGGTGGAATTAATAGTTGTGATGATGAATGCAATGAACTTTCCTCTAGAGCCATTGATCTGATAGCGACAATAGATTTCAAACAGAAGTGCATGGAAGGAGTATTCAATTATGAAAAAATCCAATCTGCTCCAAAATTGGAACTTTCTTTGAGGCGGACGCAGCCGAGTTCATATTCCCAAGGGACTGATGAAATGAAATCACTGAACCATTCTAATACTTCAGCATTTTCATTGTATACTGGTAGTAAGACATGGCAGCCTCCTCTTCATATCATATCTACTGATTCTCATAAATCTGAAGTTGGACCTGAACCATTCTCGAGTAAAATCACTCGAGATGAATGTACTTTTCCAAGGCACCGTACAAGTACTAAAGGAAATGCAGAAAACCGAGAATTTAATAATTCAGTCCCAGGCATTGATTTTGATAATGTAGGTGCTGGATATAATCACGCAGTTCAATCCAGTTTTTTTGCTCAATATGGTTTATCCACTGGGTGGAATACCAGACAAAACAGTGAGCAAGGGCAAGCGCTATTTACCATGGGAGTCCTTAAACAGCCCAATCCTGAAAATGAAAGCATAAAACAAGTTTATCTTCAATCACCCAATACTATGAGTAACTCGATGGAGCAGACTGAGCCTGAAAAGAATGTAATAAAGCCTTCAGAAACACCTAGACACGATTCTCCTGCTCCACCTCGTAGTACAAGCAGTACTTTATGTAATGAAACTTCAGATCACAATTGGCAGGAGGCAGTTGAGATGGCTGCTGCGAAGGTTGAGGGTTTAAACGACATTGGTTTTAAAGGCCCTCACTCTGGCTCTAACTTCATGACCCAGAGGGAAGCAGCTTTAACCAAGTTCCGATTGAAGCGTAAAGATCGATGCTACGAAAAAAAGGTTCGATATCAAAGCCGGAAAAGATTGGCCGAGCAGCGGCCGAGAGTAAAGGGGCAGTTTGTGCGACAAATAAAGGCAGACCCACCAATCACTGCAGCAAGATGTTCATGA 1920 43.18 MEMKPEKSKEEVEDDGCLTEVVRWERFLPRMALRVLLVEADDSTRRIISALLRKCSYRVTAVSDGLQAWETIRVKPQSIDIIMTEVDLPSISGYALLTLVMEHEVCKNIPVIMMSSQDSVSTVFKYMLRGAVDFLVKPLRSNELRNLWQHVWRRQSHGADTPCKAVASLENNAVSNYSSDIASSRQKQKECSEKEGDTQSSCTMPHVEAESAYTPNMRGLANLKSGSSSILSNTGEPEHDHSGVMEGRTGENLHAIGSEFRSCHEVYFATPLRRKENVDSIQGINREGRAGSDMHTDMEILAGGINSCDDECNELSSRAIDLIATIDFKQKCMEGVFNYEKIQSAPKLELSLRRTQPSSYSQGTDEMKSLNHSNTSAFSLYTGSKTWQPPLHIISTDSHKSEVGPEPFSSKITRDECTFPRHRTSTKGNAENREFNNSVPGIDFDNVGAGYNHAVQSSFFAQYGLSTGWNTRQNSEQGQALFTMGVLKQPNPENESIKQVYLQSPNTMSNSMEQTEPEKNVIKPSETPRHDSPAPPRSTSSTLCNETSDHNWQEAVEMAAAKVEGLNDIGFKGPHSGSNFMTQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQIKADPPITAARCS 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51449544 51453621 + Bma022393.1 Bma05g01202 83286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01202 639 MobiDBLite consensus disorder prediction 508 545 - -
Bma05g01202 639 Pfam Response regulator receiver domain 35 146 IPR001789 GO:0000160
Bma05g01202 639 SUPERFAMILY CheY-like 33 156 IPR011006 -
Bma05g01202 639 ProSiteProfiles CCT domain profile. 584 626 IPR010402 GO:0005515
Bma05g01202 639 SMART REC_2 33 148 IPR001789 GO:0000160
Bma05g01202 639 Pfam CCT motif 584 626 IPR010402 GO:0005515
Bma05g01202 639 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 10 617 - -
Bma05g01202 639 MobiDBLite consensus disorder prediction 179 203 - -
Bma05g01202 639 ProSiteProfiles Response regulatory domain profile. 34 152 IPR001789 GO:0000160
Bma05g01202 639 Gene3D - 31 212 - -
Bma05g01202 639 CDD psREC_PRR 35 138 - -
Bma05g01202 639 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 617 IPR045279 GO:0009736
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g00931 Bma05g01202 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00101 Bma-Chr3:830343 Bma05g01202 Bma-Chr5:51449544 6.48E-17 dispersed
Bma04g00577 Bma-Chr4:5325270 Bma05g01202 Bma-Chr5:51449544 3.42E-15 dispersed
Bma05g01202 Bma-Chr5:51449544 Bma10g01320 Bma-Chr10:46835309 3.15E-109 dispersed
Bma04g00931 Bma-Chr4:13096607 Bma05g01202 Bma-Chr5:51449544 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57377 PF00072 Response_reg 7.20E-19 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01202 K12130 - qsu:112004762 514.612