Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01203 ATGGATTCACAGTCATCCCATCACGGACAGATTATTGAAATTAGAGGTCCCATTGCAGATGTTGAAAGAGGCCTTGGACGAAATAAGATCTGTGGAGATGCGCCGTGTGGTTTCTCTGATCCAGGCTCCACTTCAAAAGATGCGAAAGAACGGTCATCTTCTATGCGGAAGCTGTTGATTGCAGTTTCACTCTGCGTGTTGTTCATGAGCGTAGAAGTTGCTGGTGGGATAAAAGCTAATAGTCTTGCTATCCTCACTGATGCAGCACATTTGCTTTCAGATGTTGCGTCTTTTGCCATCTCCTTGTTTTCTTTATGGGCTGCAGGTTGGGAAGCTACTCCTCGCCAATCTTACGGCTTCTTCAGAATCGAGATTCTTGGTGCTCTGGTTTCAATGCAACTCATATGGCTGATAGCTGGAATATTGGTCTATGAGGCTATTTTTAGGATTATTCACGACACGGGTGATGTGAATGGCTTTTTGATGTTTATCATTGCTTCGTTTGGTCTTGTGGTTAACATCTCCATGGCTCTGTTGTTGGGCCATGATCATAGCCATGGACATGACAATCATGGTCATGGTGTTGGGCATAGCCATGGTGGTGTGACAGTTTCCACTCATGATCACGAGCACGATCATTCTCACGAACACGCTCATCAGCATCCTCACGATCACGCGCAGCCGTTGCTCGATGAACCAAAAGACGCAACGAAAAAGAAGAAAGGGCGGAACATAAATCTGCAGGGGGCATATCTCCATGTGCTTGGGGACTCAGCACAGAGTATTGGAGTGATGATAGGAGGTGCAATTATATGGTACAAACCCGAGTGGAAGATAGTAGACTTGATTTGCACATTGATATTTTCCGTGGTCGTTTTAGGGACTACATTCAAGATGCTCCGAAGCATACTTGAAGTCTTGATGGAGAGCACACCGAGAGAAATCGATGCAACTCGGCTGGAGACGGGGCTAGTAGAGATGGAAGAAGTGGTGGCCATTCATGAACTGCATATATGGGCCATCACTGTCGGAAAAGTCCTCCTCGCGTGCCATGTCAAAATCCGACCAGACGCTGATGCTGAACGGGTATTGGACAAAGTGGTGGACTATATCAGAAAAGAATACAACATCAGCCATGTTACTGTCCAGATCGAGCGGTAA 1161 46.34 MDSQSSHHGQIIEIRGPIADVERGLGRNKICGDAPCGFSDPGSTSKDAKERSSSMRKLLIAVSLCVLFMSVEVAGGIKANSLAILTDAAHLLSDVASFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSMQLIWLIAGILVYEAIFRIIHDTGDVNGFLMFIIASFGLVVNISMALLLGHDHSHGHDNHGHGVGHSHGGVTVSTHDHEHDHSHEHAHQHPHDHAQPLLDEPKDATKKKKGRNINLQGAYLHVLGDSAQSIGVMIGGAIIWYKPEWKIVDLICTLIFSVVVLGTTFKMLRSILEVLMESTPREIDATRLETGLVEMEEVVAIHELHIWAITVGKVLLACHVKIRPDADAERVLDKVVDYIRKEYNISHVTVQIER 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51455861 51457021 + Bma022394.1 Bma05g01203 83287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01203 386 MobiDBLite consensus disorder prediction 189 231 - -
Bma05g01203 386 MobiDBLite consensus disorder prediction 203 231 - -
Bma05g01203 386 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 386 - -
Bma05g01203 386 Gene3D Cation efflux protein transmembrane domain 54 307 IPR027469 -
Bma05g01203 386 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 309 IPR027469 -
Bma05g01203 386 PANTHER METAL TOLERANCE PROTEIN A1 1 386 - -
Bma05g01203 386 Pfam Cation efflux family 58 308 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bma05g01203 386 TIGRFAM CDF: cation diffusion facilitator family transporter 55 386 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bma05g01203 386 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 316 385 IPR036837 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01203 Bma-Chr5:51455861 Bma07g01045 Bma-Chr7:42110549 0 dispersed
Bma05g01203 Bma-Chr5:51455861 Bma14g00092 Bma-Chr14:1310419 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01203 K14689 - zju:107423776 548.125