Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g01251 ATGGAAGGCGAGCTAGTAGCGGAGGTGGCTGGTGCGGCGGTCTCTTTACCGGAGACAGCGGATGGATCTTTAGCTCCGAAGGAACAGTCTCATAGGCTTGAGAGGAAGTGGACGTTTTGGTTCGACAATCAGTCTAAAACTAAACAAGGCGCTGCCTGGGGAGCTGGTCTTCGCAAAGCCTATTCCTTTGATACTGTCGAAGAGTTTTGGTGCTTATATGATCAGATATTTAAGCCAAGCAAGTTTTCTGGAAATGCAGATTTCCACCTGTTCAAAGCTGGGATTGAACCCAAGTGGGAGGATCCTGAGTGTGCGAATGGAGGGAAGTGGACTGTCCCTTGCAACCGGAAGGCTGACCTTGATAATATGTGGCTCGAAACGTTAATGGCCTTGATTGGAGAGCAATTTGATGAGGCAGATGAGATCTGTGGGGTGGTTGCAAGTGTGCGCGTTAGGCAGGACAAACTTGCTCTGTGGACTAAGACAGCAACGAATGAAGCTGTCCAGACGAGCATTGGGAGGAAGTGGAAGGAGATAATCGATATCACAGACAAGATCATTTACAGCTTCCATGATGATTCAAAAAGGGAAAGATCGGCAAAAGTTCGCTACACTGTGTAG 621 48.15 MEGELVAEVAGAAVSLPETADGSLAPKEQSHRLERKWTFWFDNQSKTKQGAAWGAGLRKAYSFDTVEEFWCLYDQIFKPSKFSGNADFHLFKAGIEPKWEDPECANGGKWTVPCNRKADLDNMWLETLMALIGEQFDEADEICGVVASVRVRQDKLALWTKTATNEAVQTSIGRKWKEIIDITDKIIYSFHDDSKRERSAKVRYTV 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51846463 51848286 - Bma022442.1 Bma05g01251 83335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g01251 206 Gene3D RNA Cap, Translation Initiation Factor Eif4e 23 206 IPR023398 -
Bma05g01251 206 PANTHER BNAA05G12740D PROTEIN 26 198 - -
Bma05g01251 206 SUPERFAMILY eIF4e-like 17 200 IPR023398 -
Bma05g01251 206 ProSitePatterns Eukaryotic initiation factor 4E signature. 87 110 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Bma05g01251 206 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 26 198 IPR001040 GO:0003723|GO:0003743|GO:0006413
Bma05g01251 206 Pfam Eukaryotic initiation factor 4E 33 185 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01670 Bma-Chr4:52510223 Bma05g01251 Bma-Chr5:51846463 1.13E-23 dispersed
Bma05g01251 Bma-Chr5:51846463 Bma14g00957 Bma-Chr14:10931089 1.74E-35 dispersed
Bma05g01251 Bma-Chr5:51846463 Bma01g01479 Bma-Chr1:28350010 3.98E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g01251 K03259 - tcc:18603290 335.88