Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma05g01251 | ATGGAAGGCGAGCTAGTAGCGGAGGTGGCTGGTGCGGCGGTCTCTTTACCGGAGACAGCGGATGGATCTTTAGCTCCGAAGGAACAGTCTCATAGGCTTGAGAGGAAGTGGACGTTTTGGTTCGACAATCAGTCTAAAACTAAACAAGGCGCTGCCTGGGGAGCTGGTCTTCGCAAAGCCTATTCCTTTGATACTGTCGAAGAGTTTTGGTGCTTATATGATCAGATATTTAAGCCAAGCAAGTTTTCTGGAAATGCAGATTTCCACCTGTTCAAAGCTGGGATTGAACCCAAGTGGGAGGATCCTGAGTGTGCGAATGGAGGGAAGTGGACTGTCCCTTGCAACCGGAAGGCTGACCTTGATAATATGTGGCTCGAAACGTTAATGGCCTTGATTGGAGAGCAATTTGATGAGGCAGATGAGATCTGTGGGGTGGTTGCAAGTGTGCGCGTTAGGCAGGACAAACTTGCTCTGTGGACTAAGACAGCAACGAATGAAGCTGTCCAGACGAGCATTGGGAGGAAGTGGAAGGAGATAATCGATATCACAGACAAGATCATTTACAGCTTCCATGATGATTCAAAAAGGGAAAGATCGGCAAAAGTTCGCTACACTGTGTAG | 621 | 48.15 | MEGELVAEVAGAAVSLPETADGSLAPKEQSHRLERKWTFWFDNQSKTKQGAAWGAGLRKAYSFDTVEEFWCLYDQIFKPSKFSGNADFHLFKAGIEPKWEDPECANGGKWTVPCNRKADLDNMWLETLMALIGEQFDEADEICGVVASVRVRQDKLALWTKTATNEAVQTSIGRKWKEIIDITDKIIYSFHDDSKRERSAKVRYTV | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 51846463 | 51848286 | - | Bma022442.1 | Bma05g01251 | 83335 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma05g01251 | 206 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 23 | 206 | IPR023398 | - | |
Bma05g01251 | 206 | PANTHER | BNAA05G12740D PROTEIN | 26 | 198 | - | - | |
Bma05g01251 | 206 | SUPERFAMILY | eIF4e-like | 17 | 200 | IPR023398 | - | |
Bma05g01251 | 206 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 87 | 110 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 | |
Bma05g01251 | 206 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 26 | 198 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Bma05g01251 | 206 | Pfam | Eukaryotic initiation factor 4E | 33 | 185 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01670 | Bma-Chr4:52510223 | Bma05g01251 | Bma-Chr5:51846463 | 1.13E-23 | dispersed | |
Bma05g01251 | Bma-Chr5:51846463 | Bma14g00957 | Bma-Chr14:10931089 | 1.74E-35 | dispersed | |
Bma05g01251 | Bma-Chr5:51846463 | Bma01g01479 | Bma-Chr1:28350010 | 3.98E-68 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma05g01251 | K03259 | - | tcc:18603290 | 335.88 |